RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 PSMA4P25789 261 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC38Q502W7 563 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 DNAJC21Q5F1R6 531 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 SLC4A10Q6U841 1118 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 A0A1B0GUA9 196 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 KIF4AO95239 1232 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 EIF5P55010 431 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 PDCLQ13371 301 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 ZFYVE27Q5T4F4 411 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 RSPH3Q86UC2 560 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 IKBKGQ9Y6K9 419 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 U2SURPO15042 1029 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC63Q8NA47 563 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 ATP2A3Q93084 1043 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 DIABLOQ9NR28 239 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 HOMER2Q9NSB8 354 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 HOOK1Q9UJC3 728 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 ABT1Q9ULW3 272 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 SOX12O15370 315 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 PSMC4P43686 418 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC178Q5BJE1 867 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 TMCO3Q6UWJ1 677 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 RWDD1Q9H446 243 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 H0YC42 278 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 CASQ2O14958 399 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 PFDN1O60925 122 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 RHOBTB1O94844 696 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 PPP1R14BQ96C90 147 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 SLKQ9H2G2 1235 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 PALMDQ9NP74 551 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 DAAM1Q9Y4D1 1078 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 A0A0G2JS52 829 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 FSD2A1L4K1 749 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 BUB1BO60566 1050 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 SESN3P58005 492 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 NMIQ13287 307 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC96Q2M329 555 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 EFHD2Q96C19 240 aaPredicted RBP4.8□□□□□ -1.64
RGPD1-202ENST00000409776 LMNB2Q03252 620 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 SPECC1LQ69YQ0 1117 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 FMNL2Q96PY5 1086 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 THEGQ9P2T0 379 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 DMRT2Q9Y5R5 561 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 RFX1P22670 979 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 TRDNQ13061 729 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 LZICQ8WZA0 190 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 SYNCQ9H7C4 482 aa4.8□□□□□ -1.64
RGPD1-202ENST00000409776 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 FOXD4L6Q3SYB3 417 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 FOXD4L3Q6VB84 417 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 PHLDB2Q86SQ0 1253 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TMEM57Q8N5G2 664 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TSG101Q99816 390 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 ODF2LQ9ULJ1 636 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 LUC7L2Q9Y383 392 aaKnown RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 IMMTQ16891 758 aaKnown RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 FBF1Q8TES7 1133 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC102AQ96A19 550 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TPD52P55327 224 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 CBX1P83916 185 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 RPAINQ86UA6 219 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 AFAP1Q8N556 730 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 NUCKS1Q9H1E3 243 aaKnown RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 ATG3Q9NT62 314 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 GOLGA6BA6NDN3 693 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 SFSWAPQ12872 951 aaKnown RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 IKQ13123 557 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 CAMK4Q16566 473 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 SKOR2Q2VWA4 1001 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 FAM161AQ3B820 660 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 ZNF365Q70YC5 407 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 SPDL1Q96EA4 605 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TRIM5Q9C035 493 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TAOK3Q9H2K8 898 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 KIF5CO60282 957 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 TTC31Q49AM3 519 aaPredicted RBP4.79□□□□□ -1.64
RGPD1-202ENST00000409776 UBAC1Q9BSL1 405 aa4.79□□□□□ -1.64
RGPD1-202ENST00000409776 REC8O95072 547 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC172P0C7W6 258 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 ZFXP17010 805 aaPredicted RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 TRIM11Q96F44 468 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 MRFAP1Q9Y605 127 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 TRIM21P19474 475 aaKnown RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 TMED1Q13445 227 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC157Q569K6 752 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 TTC16Q8NEE8 873 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 LSM14BQ9BX40 385 aaKnown RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 IRAK4Q9NWZ3 460 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 MSR1P21757 451 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 IQCDQ96DY2 449 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 DSEQ9UL01 958 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 LONP1P36776 959 aaKnown RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
RGPD1-202ENST00000409776 TAF7Q15545 349 aaPredicted RBP4.78□□□□□ -1.64
RGPD1-202ENST00000409776 AMOTQ4VCS5 1084 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms