RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
PDE6D-202ENST00000409772 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
PDE6D-202ENST00000409772 ACSBG1Q96GR2 724 aa23.2■■□□□ 1.3
PDE6D-202ENST00000409772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
PDE6D-202ENST00000409772 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
PDE6D-202ENST00000409772 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
PDE6D-202ENST00000409772 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
PDE6D-202ENST00000409772 KAT6BQ8WYB5 2073 aa23.19■■□□□ 1.3
PDE6D-202ENST00000409772 MEGF6O75095 1541 aa23.18■■□□□ 1.3
PDE6D-202ENST00000409772 KCNQ2O43526 872 aa23.18■■□□□ 1.3
PDE6D-202ENST00000409772 PLEKHG2Q9H7P9 1386 aa23.17■■□□□ 1.3
PDE6D-202ENST00000409772 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
PDE6D-202ENST00000409772 MTHFSP49914 203 aa23.16■■□□□ 1.3
PDE6D-202ENST00000409772 SRCAPQ6ZRS2 3230 aa23.14■■□□□ 1.3
PDE6D-202ENST00000409772 PTF1AQ7RTS3 328 aa23.14■■□□□ 1.29
PDE6D-202ENST00000409772 SYTL4Q96C24 671 aaPredicted RBP23.14■■□□□ 1.29
PDE6D-202ENST00000409772 IGSF1Q8N6C5 1336 aa23.13■■□□□ 1.29
PDE6D-202ENST00000409772 HMGB2P26583 209 aaKnown RBP23.13■■□□□ 1.29
PDE6D-202ENST00000409772 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
PDE6D-202ENST00000409772 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
PDE6D-202ENST00000409772 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
PDE6D-202ENST00000409772 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
PDE6D-202ENST00000409772 R3HDM1Q15032 1099 aaKnown RBP23.11■■□□□ 1.29
PDE6D-202ENST00000409772 AMOTQ4VCS5 1084 aa23.11■■□□□ 1.29
PDE6D-202ENST00000409772 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
PDE6D-202ENST00000409772 IL13P35225 146 aa23.1■■□□□ 1.29
PDE6D-202ENST00000409772 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
PDE6D-202ENST00000409772 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
PDE6D-202ENST00000409772 IFNL2Q8IZJ0 200 aa23.1■■□□□ 1.29
PDE6D-202ENST00000409772 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
PDE6D-202ENST00000409772 CYP27B1O15528 508 aa23.09■■□□□ 1.29
PDE6D-202ENST00000409772 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
PDE6D-202ENST00000409772 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
PDE6D-202ENST00000409772 PROM2Q8N271 834 aa23.09■■□□□ 1.29
PDE6D-202ENST00000409772 RREB1Q92766 1687 aa23.07■■□□□ 1.28
PDE6D-202ENST00000409772 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
PDE6D-202ENST00000409772 HSP90AB1P08238 724 aaKnown RBP23.06■■□□□ 1.28
PDE6D-202ENST00000409772 SULT6B1Q6IMI4 303 aa23.06■■□□□ 1.28
PDE6D-202ENST00000409772 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
PDE6D-202ENST00000409772 STK32BQ9NY57 414 aa23.04■■□□□ 1.28
PDE6D-202ENST00000409772 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
PDE6D-202ENST00000409772 PHKG2P15735 406 aa23.03■■□□□ 1.28
PDE6D-202ENST00000409772 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.28
PDE6D-202ENST00000409772 MPRIPQ6WCQ1 1025 aa23.02■■□□□ 1.28
PDE6D-202ENST00000409772 BTAF1O14981 1849 aa23.02■■□□□ 1.28
PDE6D-202ENST00000409772 KDRP35968 1356 aa23.01■■□□□ 1.27
PDE6D-202ENST00000409772 C1orf141Q5JVX7 400 aa23.01■■□□□ 1.27
PDE6D-202ENST00000409772 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
PDE6D-202ENST00000409772 NUP188Q5SRE5 1749 aa23.01■■□□□ 1.27
PDE6D-202ENST00000409772 NUDCQ9Y266 331 aa23■■□□□ 1.27
PDE6D-202ENST00000409772 SLC15A2Q16348 729 aa22.99■■□□□ 1.27
PDE6D-202ENST00000409772 ZNF530Q6P9A1 599 aaPredicted RBP22.99■■□□□ 1.27
PDE6D-202ENST00000409772 AEBP1Q8IUX7 1158 aa22.99■■□□□ 1.27
PDE6D-202ENST00000409772 DCAF5Q96JK2 942 aa22.99■■□□□ 1.27
PDE6D-202ENST00000409772 ERVV-2B6SEH9 535 aa22.98■■□□□ 1.27
PDE6D-202ENST00000409772 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
PDE6D-202ENST00000409772 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
PDE6D-202ENST00000409772 PPP2R1AP30153 589 aa22.97■■□□□ 1.27
PDE6D-202ENST00000409772 U2SURPO15042 1029 aaKnown RBP22.96■■□□□ 1.27
PDE6D-202ENST00000409772 HMOX1P09601 288 aa22.95■■□□□ 1.26
PDE6D-202ENST00000409772 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
PDE6D-202ENST00000409772 PIGBQ92521 554 aa22.95■■□□□ 1.26
PDE6D-202ENST00000409772 LRRC4BQ9NT99 713 aa22.95■■□□□ 1.26
PDE6D-202ENST00000409772 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
PDE6D-202ENST00000409772 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
PDE6D-202ENST00000409772 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
PDE6D-202ENST00000409772 RALBP1Q15311 655 aa22.92■■□□□ 1.26
PDE6D-202ENST00000409772 SPON1Q9HCB6 807 aa22.92■■□□□ 1.26
PDE6D-202ENST00000409772 CABP4P57796 275 aa22.91■■□□□ 1.26
PDE6D-202ENST00000409772 PALLDQ8WX93 1383 aa22.9■■□□□ 1.26
PDE6D-202ENST00000409772 ITGB4P16144 1822 aa22.88■■□□□ 1.25
PDE6D-202ENST00000409772 AKT1S1Q96B36 256 aa22.88■■□□□ 1.25
PDE6D-202ENST00000409772 TFCP2L1Q9NZI6 479 aa22.88■■□□□ 1.25
PDE6D-202ENST00000409772 LY75O60449 1722 aa22.88■■□□□ 1.25
PDE6D-202ENST00000409772 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
PDE6D-202ENST00000409772 LRP5O75197 1615 aa22.87■■□□□ 1.25
PDE6D-202ENST00000409772 FCHSD2O94868 740 aa22.87■■□□□ 1.25
PDE6D-202ENST00000409772 U2AF1L5P0DN76 240 aaPredicted RBP22.86■■□□□ 1.25
PDE6D-202ENST00000409772 U2AF1Q01081 240 aaKnown RBP eCLIP22.86■■□□□ 1.25
PDE6D-202ENST00000409772 GAS2L2Q8NHY3 880 aa22.86■■□□□ 1.25
PDE6D-202ENST00000409772 SLC16A10Q8TF71 515 aa22.86■■□□□ 1.25
PDE6D-202ENST00000409772 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
PDE6D-202ENST00000409772 ASAP1Q9ULH1 1129 aa22.85■■□□□ 1.25
PDE6D-202ENST00000409772 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 KCNQ4P56696 695 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 SIK1P57059 783 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 ZNF827Q17R98 1081 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 NFATC2IPQ8NCF5 419 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 FLAD1Q8NFF5 587 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 ATG3Q9NT62 314 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 TOGARAM1Q9Y4F4 1720 aa22.84■■□□□ 1.25
PDE6D-202ENST00000409772 NEFMP07197 916 aa22.83■■□□□ 1.25
PDE6D-202ENST00000409772 MTFR1LQ9H019 292 aa22.83■■□□□ 1.25
PDE6D-202ENST00000409772 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
PDE6D-202ENST00000409772 PPP1R1BQ9UD71 204 aaPredicted RBP22.83■■□□□ 1.25
PDE6D-202ENST00000409772 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
PDE6D-202ENST00000409772 GNAT3A8MTJ3 354 aa22.81■■□□□ 1.24
PDE6D-202ENST00000409772 RNMTO43148 476 aaKnown RBP22.81■■□□□ 1.24
PDE6D-202ENST00000409772 PRKAR2BP31323 418 aa22.81■■□□□ 1.24
PDE6D-202ENST00000409772 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms