RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 ACSBG1Q96GR2 724 aa24.68■■□□□ 1.54
ITM2C-204ENST00000409704 KCNQ2O43526 872 aa24.67■■□□□ 1.54
ITM2C-204ENST00000409704 PAPPAQ13219 1627 aa24.67■■□□□ 1.54
ITM2C-204ENST00000409704 CASZ1Q86V15 1759 aa24.65■■□□□ 1.54
ITM2C-204ENST00000409704 WASHC2AQ641Q2 1341 aa24.64■■□□□ 1.54
ITM2C-204ENST00000409704 PPM1GO15355 546 aaPredicted RBP24.64■■□□□ 1.54
ITM2C-204ENST00000409704 NBPF14Q5TI25 921 aa24.64■■□□□ 1.54
ITM2C-204ENST00000409704 DDX54Q8TDD1 881 aaKnown RBP24.64■■□□□ 1.54
ITM2C-204ENST00000409704 POLKQ9UBT6 870 aa24.64■■□□□ 1.54
ITM2C-204ENST00000409704 RAPGEF4Q8WZA2 1011 aa24.63■■□□□ 1.53
ITM2C-204ENST00000409704 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
ITM2C-204ENST00000409704 ANO8Q9HCE9 1232 aaPredicted RBP24.62■■□□□ 1.53
ITM2C-204ENST00000409704 KAT6BQ8WYB5 2073 aa24.62■■□□□ 1.53
ITM2C-204ENST00000409704 TOGARAM1Q9Y4F4 1720 aa24.61■■□□□ 1.53
ITM2C-204ENST00000409704 TATP17735 454 aaPredicted RBP24.61■■□□□ 1.53
ITM2C-204ENST00000409704 TNNT2P45379 298 aaPredicted RBP24.61■■□□□ 1.53
ITM2C-204ENST00000409704 PROM2Q8N271 834 aa24.61■■□□□ 1.53
ITM2C-204ENST00000409704 LY75O60449 1722 aa24.59■■□□□ 1.53
ITM2C-204ENST00000409704 TXNRD1Q16881 649 aa24.59■■□□□ 1.53
ITM2C-204ENST00000409704 PCDH11XQ9BZA7 1347 aa24.58■■□□□ 1.52
ITM2C-204ENST00000409704 PCDH11YQ9BZA8 1340 aa24.58■■□□□ 1.52
ITM2C-204ENST00000409704 KNSTRNQ9Y448 316 aa24.57■■□□□ 1.52
ITM2C-204ENST00000409704 EIF4A2Q14240 407 aaKnown RBP24.55■■□□□ 1.52
ITM2C-204ENST00000409704 MORC1Q86VD1 984 aa24.55■■□□□ 1.52
ITM2C-204ENST00000409704 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
ITM2C-204ENST00000409704 EYA1Q99502 592 aa24.54■■□□□ 1.52
ITM2C-204ENST00000409704 ITGB4P16144 1822 aa24.54■■□□□ 1.52
ITM2C-204ENST00000409704 QSER1Q2KHR3 1735 aa24.52■■□□□ 1.52
ITM2C-204ENST00000409704 PRIM1P49642 420 aaKnown RBP24.51■■□□□ 1.51
ITM2C-204ENST00000409704 SYTL4Q96C24 671 aaPredicted RBP24.51■■□□□ 1.51
ITM2C-204ENST00000409704 IGSF1Q8N6C5 1336 aa24.51■■□□□ 1.51
ITM2C-204ENST00000409704 TUBGCP6Q96RT7 1819 aa24.51■■□□□ 1.51
ITM2C-204ENST00000409704 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
ITM2C-204ENST00000409704 CYP27B1O15528 508 aa24.49■■□□□ 1.51
ITM2C-204ENST00000409704 STK32BQ9NY57 414 aa24.49■■□□□ 1.51
ITM2C-204ENST00000409704 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
ITM2C-204ENST00000409704 SLC15A2Q16348 729 aa24.47■■□□□ 1.51
ITM2C-204ENST00000409704 LRRC4BQ9NT99 713 aa24.46■■□□□ 1.51
ITM2C-204ENST00000409704 C5P01031 1676 aa24.46■■□□□ 1.51
ITM2C-204ENST00000409704 SPG7Q9UQ90 795 aa24.45■■□□□ 1.5
ITM2C-204ENST00000409704 SLC27A3Q5K4L6 730 aa24.44■■□□□ 1.5
ITM2C-204ENST00000409704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.44■■□□□ 1.5
ITM2C-204ENST00000409704 NPC1L1Q9UHC9 1359 aa24.43■■□□□ 1.5
ITM2C-204ENST00000409704 PDGFDQ9GZP0 370 aaPredicted RBP24.43■■□□□ 1.5
ITM2C-204ENST00000409704 TAF1LQ8IZX4 1826 aa24.42■■□□□ 1.5
ITM2C-204ENST00000409704 ZNF827Q17R98 1081 aa24.42■■□□□ 1.5
ITM2C-204ENST00000409704 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
ITM2C-204ENST00000409704 NKX1-1Q15270 411 aaPredicted RBP24.41■■□□□ 1.5
ITM2C-204ENST00000409704 CC2D1BQ5T0F9 858 aaKnown RBP24.39■■□□□ 1.49
ITM2C-204ENST00000409704 KDRP35968 1356 aa24.39■■□□□ 1.49
ITM2C-204ENST00000409704 PHKG2P15735 406 aa24.38■■□□□ 1.49
ITM2C-204ENST00000409704 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
ITM2C-204ENST00000409704 KCNQ4P56696 695 aa24.37■■□□□ 1.49
ITM2C-204ENST00000409704 AKT1S1Q96B36 256 aa24.37■■□□□ 1.49
ITM2C-204ENST00000409704 CCNL1Q9UK58 526 aaPredicted RBP24.37■■□□□ 1.49
ITM2C-204ENST00000409704 COL3A1P02461 1466 aaPredicted RBP24.37■■□□□ 1.49
ITM2C-204ENST00000409704 COL24A1Q17RW2 1714 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 ZBTB7AO95365 584 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 IL13P35225 146 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 MPRIPQ6WCQ1 1025 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 AEBP1Q8IUX7 1158 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
ITM2C-204ENST00000409704 MTHFSP49914 203 aa24.34■■□□□ 1.49
ITM2C-204ENST00000409704 C4BP0C0L5 1744 aa24.34■■□□□ 1.49
ITM2C-204ENST00000409704 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
ITM2C-204ENST00000409704 KDM6AO15550 1401 aaPredicted RBP24.33■■□□□ 1.49
ITM2C-204ENST00000409704 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
ITM2C-204ENST00000409704 PIGBQ92521 554 aa24.32■■□□□ 1.48
ITM2C-204ENST00000409704 MTFR1LQ9H019 292 aa24.32■■□□□ 1.48
ITM2C-204ENST00000409704 PTGER2P43116 358 aa24.31■■□□□ 1.48
ITM2C-204ENST00000409704 PLEKHO1Q53GL0 409 aaPredicted RBP24.31■■□□□ 1.48
ITM2C-204ENST00000409704 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
ITM2C-204ENST00000409704 PNPLA7Q6ZV29 1317 aa24.31■■□□□ 1.48
ITM2C-204ENST00000409704 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
ITM2C-204ENST00000409704 ZNF530Q6P9A1 599 aaPredicted RBP24.3■■□□□ 1.48
ITM2C-204ENST00000409704 SMARCC1Q92922 1105 aaPredicted RBP24.3■■□□□ 1.48
ITM2C-204ENST00000409704 TMOD3Q9NYL9 352 aa24.3■■□□□ 1.48
ITM2C-204ENST00000409704 AMOTQ4VCS5 1084 aa24.29■■□□□ 1.48
ITM2C-204ENST00000409704 ATF5Q9Y2D1 282 aaPredicted RBP24.29■■□□□ 1.48
ITM2C-204ENST00000409704 UBR3Q6ZT12 1888 aa24.28■■□□□ 1.48
ITM2C-204ENST00000409704 ZNF831Q5JPB2 1677 aa24.28■■□□□ 1.48
ITM2C-204ENST00000409704 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
ITM2C-204ENST00000409704 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
ITM2C-204ENST00000409704 TFCP2L1Q9NZI6 479 aa24.27■■□□□ 1.48
ITM2C-204ENST00000409704 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
ITM2C-204ENST00000409704 SGIP1Q9BQI5 828 aa24.26■■□□□ 1.47
ITM2C-204ENST00000409704 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
ITM2C-204ENST00000409704 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
ITM2C-204ENST00000409704 COL5A3P25940 1745 aaPredicted RBP24.24■■□□□ 1.47
ITM2C-204ENST00000409704 ERVV-2B6SEH9 535 aa24.23■■□□□ 1.47
ITM2C-204ENST00000409704 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
ITM2C-204ENST00000409704 ASAP1Q9ULH1 1129 aa24.23■■□□□ 1.47
ITM2C-204ENST00000409704 MRC1P22897 1456 aa24.23■■□□□ 1.47
ITM2C-204ENST00000409704 CICQ96RK0 1608 aaPredicted RBP24.22■■□□□ 1.47
ITM2C-204ENST00000409704 HMOX1P09601 288 aa24.22■■□□□ 1.47
ITM2C-204ENST00000409704 SLC16A10Q8TF71 515 aa24.22■■□□□ 1.47
ITM2C-204ENST00000409704 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
ITM2C-204ENST00000409704 SIK1P57059 783 aa24.21■■□□□ 1.47
ITM2C-204ENST00000409704 HMGB2P26583 209 aaKnown RBP24.2■■□□□ 1.46
ITM2C-204ENST00000409704 ATG3Q9NT62 314 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms