RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 APAF1O14727 1248 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
SH3D19-203ENST00000409598 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 HOOK2Q96ED9 719 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 NACAP1Q9BZK3 213 aa9.14□□□□□ -0.95
SH3D19-203ENST00000409598 LDHCP07864 332 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
SH3D19-203ENST00000409598 BIN2Q9UBW5 565 aaPredicted RBP9.13□□□□□ -0.95
SH3D19-203ENST00000409598 MPHOSPH10O00566 681 aaKnown RBP9.13□□□□□ -0.95
SH3D19-203ENST00000409598 TCIRG1Q13488 830 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 LTKP29376 864 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 ATP2B2Q01814 1243 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 NSD2O96028 1365 aa9.13□□□□□ -0.95
SH3D19-203ENST00000409598 TRIM37O94972 964 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 SART3Q15020 963 aaKnown RBP9.12□□□□□ -0.95
SH3D19-203ENST00000409598 WDR78Q5VTH9 848 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 NAP1L5Q96NT1 182 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-203ENST00000409598 GRIN3BO60391 1043 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 THRAP3Q9Y2W1 955 aaKnown RBP9.12□□□□□ -0.95
SH3D19-203ENST00000409598 NSD3Q9BZ95 1437 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 TNNI2P48788 182 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 CCDC152Q4G0S7 254 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
SH3D19-203ENST00000409598 GJA3Q9Y6H8 435 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
SH3D19-203ENST00000409598 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
SH3D19-203ENST00000409598 ANKRD18BA2A2Z9 1011 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 CLASRPQ8N2M8 674 aaKnown RBP9.11□□□□□ -0.95
SH3D19-203ENST00000409598 RAI14Q9P0K7 980 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 AKAP2Q9Y2D5 859 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 A2ML1A8K2U0 1454 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 RGS3P49796 1198 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 PIK3C2GO75747 1445 aa9.11□□□□□ -0.95
SH3D19-203ENST00000409598 IFIT5Q13325 482 aaKnown RBP9.11□□□□□ -0.95
SH3D19-203ENST00000409598 RALYLQ86SE5 291 aaKnown RBP9.11□□□□□ -0.95
SH3D19-203ENST00000409598 BRD4O60885 1362 aaPredicted RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 SPTY2D1Q68D10 685 aaPredicted RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 DZIP1Q86YF9 867 aaKnown RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 IP6K1Q92551 441 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 KIF22Q14807 665 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 RNF20Q5VTR2 975 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 PUS7Q96PZ0 661 aaKnown RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 RCAN3Q9UKA8 241 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 DDX19BQ9UMR2 479 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 NIP7Q9Y221 180 aaKnown RBP eCLIP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 ALDH1B1P30837 517 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 TWISTNBQ3B726 338 aaPredicted RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 METTL24Q5JXM2 366 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 SLC5A1P13866 664 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 CCT4P50991 539 aaKnown RBP9.1□□□□□ -0.95
SH3D19-203ENST00000409598 TRIM29Q14134 588 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 NFE2L2Q16236 605 aa9.1□□□□□ -0.95
SH3D19-203ENST00000409598 YTHDC2Q9H6S0 1430 aaKnown RBP9.09□□□□□ -0.95
SH3D19-203ENST00000409598 NIM1KQ8IY84 436 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
SH3D19-203ENST00000409598 AKAP4Q5JQC9 854 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 FANCIQ9NVI1 1328 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 PTPRMP28827 1452 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 H7C1D1 291 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
SH3D19-203ENST00000409598 UTP14AQ9BVJ6 771 aaKnown RBP9.09□□□□□ -0.95
SH3D19-203ENST00000409598 FLT4P35916 1363 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 OTUD7BQ6GQQ9 843 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 DZIP3Q86Y13 1208 aaKnown RBP9.08□□□□□ -0.96
SH3D19-203ENST00000409598 ANKRD18AQ8IVF6 992 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 FEZ1Q99689 392 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
SH3D19-203ENST00000409598 ZKSCAN1P17029 563 aaPredicted RBP9.08□□□□□ -0.96
SH3D19-203ENST00000409598 GPTP24298 496 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 TMEM132AQ24JP5 1023 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
SH3D19-203ENST00000409598 ZCCHC11Q5TAX3 1644 aaKnown RBP9.08□□□□□ -0.96
SH3D19-203ENST00000409598 HECW2Q9P2P5 1572 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 SLC4A2P04920 1241 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 RILPL2Q969X0 211 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 HLA-DOAP06340 250 aa9.08□□□□□ -0.96
SH3D19-203ENST00000409598 GOLGA6L6A8MZA4 724 aa9.07□□□□□ -0.96
SH3D19-203ENST00000409598 GSTO1P78417 241 aa9.07□□□□□ -0.96
SH3D19-203ENST00000409598 ZGPATQ8N5A5 531 aaKnown RBP9.07□□□□□ -0.96
SH3D19-203ENST00000409598 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
SH3D19-203ENST00000409598 CPLX1O14810 134 aa9.07□□□□□ -0.96
SH3D19-203ENST00000409598 PPP2R1AP30153 589 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms