RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ANKRD36BQ8N2N9 1353 aa23.99■■□□□ 1.43
SCRN1-203ENST00000409570 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
SCRN1-203ENST00000409570 SYTL4Q96C24 671 aaPredicted RBP23.97■■□□□ 1.43
SCRN1-203ENST00000409570 PUS7Q96PZ0 661 aaKnown RBP23.97■■□□□ 1.43
SCRN1-203ENST00000409570 TFCP2L1Q9NZI6 479 aa23.97■■□□□ 1.43
SCRN1-203ENST00000409570 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.42
SCRN1-203ENST00000409570 NLGN2Q8NFZ4 835 aa23.95■■□□□ 1.42
SCRN1-203ENST00000409570 HOXC9P31274 260 aa23.94■■□□□ 1.42
SCRN1-203ENST00000409570 MEGF6O75095 1541 aa23.94■■□□□ 1.42
SCRN1-203ENST00000409570 FBLN1P23142 703 aa23.93■■□□□ 1.42
SCRN1-203ENST00000409570 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
SCRN1-203ENST00000409570 ZCRB1Q8TBF4 217 aaKnown RBP23.93■■□□□ 1.42
SCRN1-203ENST00000409570 COG3Q96JB2 828 aa23.91■■□□□ 1.42
SCRN1-203ENST00000409570 TAF1LQ8IZX4 1826 aa23.9■■□□□ 1.42
SCRN1-203ENST00000409570 AMPHP49418 695 aa23.9■■□□□ 1.42
SCRN1-203ENST00000409570 CCNL1Q9UK58 526 aaPredicted RBP23.9■■□□□ 1.42
SCRN1-203ENST00000409570 C5P01031 1676 aa23.89■■□□□ 1.42
SCRN1-203ENST00000409570 GIGYF1O75420 1035 aaPredicted RBP23.89■■□□□ 1.41
SCRN1-203ENST00000409570 COL23A1Q86Y22 540 aaPredicted RBP23.88■■□□□ 1.41
SCRN1-203ENST00000409570 TESK2Q96S53 571 aa23.88■■□□□ 1.41
SCRN1-203ENST00000409570 YBX3P16989 372 aaKnown RBP eCLIP23.87■■□□□ 1.41
SCRN1-203ENST00000409570 USP47Q96K76 1375 aa23.86■■□□□ 1.41
SCRN1-203ENST00000409570 NBPF6Q5VWK0 638 aa23.85■■□□□ 1.41
SCRN1-203ENST00000409570 NBPF4Q96M43 638 aa23.85■■□□□ 1.41
SCRN1-203ENST00000409570 RTL1A6NKG5 1358 aa23.85■■□□□ 1.41
SCRN1-203ENST00000409570 CEP350Q5VT06 3117 aa23.84■■□□□ 1.41
SCRN1-203ENST00000409570 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
SCRN1-203ENST00000409570 ITGB4P16144 1822 aa23.83■■□□□ 1.41
SCRN1-203ENST00000409570 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
SCRN1-203ENST00000409570 MSH5O43196 834 aa23.83■■□□□ 1.41
SCRN1-203ENST00000409570 RRS1Q15050 365 aaKnown RBP23.83■■□□□ 1.41
SCRN1-203ENST00000409570 GRIN3BO60391 1043 aa23.82■■□□□ 1.4
SCRN1-203ENST00000409570 USHBP1Q8N6Y0 703 aa23.82■■□□□ 1.4
SCRN1-203ENST00000409570 CGNL1Q0VF96 1302 aa23.82■■□□□ 1.4
SCRN1-203ENST00000409570 MSL1Q68DK7 614 aa23.81■■□□□ 1.4
SCRN1-203ENST00000409570 KIF20BQ96Q89 1820 aa23.8■■□□□ 1.4
SCRN1-203ENST00000409570 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
SCRN1-203ENST00000409570 FYB1O15117 783 aa23.78■■□□□ 1.4
SCRN1-203ENST00000409570 RAPGEF4Q8WZA2 1011 aa23.78■■□□□ 1.4
SCRN1-203ENST00000409570 UBR3Q6ZT12 1888 aa23.77■■□□□ 1.4
SCRN1-203ENST00000409570 GGNBP2Q9H3C7 697 aa23.77■■□□□ 1.4
SCRN1-203ENST00000409570 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
SCRN1-203ENST00000409570 C4BP0C0L5 1744 aa23.76■■□□□ 1.39
SCRN1-203ENST00000409570 TATP17735 454 aaPredicted RBP23.76■■□□□ 1.39
SCRN1-203ENST00000409570 ATP10DQ9P241 1426 aa23.76■■□□□ 1.39
SCRN1-203ENST00000409570 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
SCRN1-203ENST00000409570 CD2APQ9Y5K6 639 aa23.75■■□□□ 1.39
SCRN1-203ENST00000409570 PALLDQ8WX93 1383 aa23.75■■□□□ 1.39
SCRN1-203ENST00000409570 PKD1L3Q7Z443 1732 aa23.74■■□□□ 1.39
SCRN1-203ENST00000409570 PCDH11XQ9BZA7 1347 aa23.74■■□□□ 1.39
SCRN1-203ENST00000409570 PCDH11YQ9BZA8 1340 aa23.74■■□□□ 1.39
SCRN1-203ENST00000409570 INSRP06213 1382 aa23.74■■□□□ 1.39
SCRN1-203ENST00000409570 HSP90AB2PQ58FF8 381 aa23.73■■□□□ 1.39
SCRN1-203ENST00000409570 FLAD1Q8NFF5 587 aa23.73■■□□□ 1.39
SCRN1-203ENST00000409570 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
SCRN1-203ENST00000409570 MPRIPQ6WCQ1 1025 aa23.72■■□□□ 1.39
SCRN1-203ENST00000409570 CYP27B1O15528 508 aa23.71■■□□□ 1.39
SCRN1-203ENST00000409570 HMGB2P26583 209 aaKnown RBP23.71■■□□□ 1.39
SCRN1-203ENST00000409570 FLT4P35916 1363 aa23.7■■□□□ 1.38
SCRN1-203ENST00000409570 AMIGO3Q86WK7 504 aa23.7■■□□□ 1.38
SCRN1-203ENST00000409570 ADCY9O60503 1353 aa23.69■■□□□ 1.38
SCRN1-203ENST00000409570 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
SCRN1-203ENST00000409570 IFFO2Q5TF58 517 aa23.67■■□□□ 1.38
SCRN1-203ENST00000409570 TMF1P82094 1093 aa23.66■■□□□ 1.38
SCRN1-203ENST00000409570 SMARCC1Q92922 1105 aaPredicted RBP23.66■■□□□ 1.38
SCRN1-203ENST00000409570 AK7Q96M32 723 aa23.66■■□□□ 1.38
SCRN1-203ENST00000409570 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
SCRN1-203ENST00000409570 SMIM5Q71RC9 77 aa23.65■■□□□ 1.38
SCRN1-203ENST00000409570 GPBP1L1Q9HC44 474 aaPredicted RBP23.65■■□□□ 1.38
SCRN1-203ENST00000409570 NCAPD2Q15021 1401 aa23.65■■□□□ 1.38
SCRN1-203ENST00000409570 PIGBQ92521 554 aa23.64■■□□□ 1.37
SCRN1-203ENST00000409570 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
SCRN1-203ENST00000409570 PHF14O94880 888 aa23.63■■□□□ 1.37
SCRN1-203ENST00000409570 NSD3Q9BZ95 1437 aa23.62■■□□□ 1.37
SCRN1-203ENST00000409570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.62■■□□□ 1.37
SCRN1-203ENST00000409570 NKX1-1Q15270 411 aaPredicted RBP23.62■■□□□ 1.37
SCRN1-203ENST00000409570 EMILIN1Q9Y6C2 1016 aa23.62■■□□□ 1.37
SCRN1-203ENST00000409570 LINC00116Q8NCU8 138 aa23.6■■□□□ 1.37
SCRN1-203ENST00000409570 ZNF526Q8TF50 670 aaPredicted RBP23.6■■□□□ 1.37
SCRN1-203ENST00000409570 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
SCRN1-203ENST00000409570 KIF13BQ9NQT8 1826 aa23.59■■□□□ 1.37
SCRN1-203ENST00000409570 LOC102724428A0A0B4J2F2 783 aa23.59■■□□□ 1.37
SCRN1-203ENST00000409570 SSFA2P28290 1259 aa23.59■■□□□ 1.37
SCRN1-203ENST00000409570 SIK1P57059 783 aa23.59■■□□□ 1.37
SCRN1-203ENST00000409570 CARD14Q9BXL6 1004 aa23.59■■□□□ 1.37
SCRN1-203ENST00000409570 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
SCRN1-203ENST00000409570 HSPA6P17066 643 aa23.57■■□□□ 1.36
SCRN1-203ENST00000409570 SPG7Q9UQ90 795 aa23.57■■□□□ 1.36
SCRN1-203ENST00000409570 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
SCRN1-203ENST00000409570 N4BP2Q86UW6 1770 aaPredicted RBP23.55■■□□□ 1.36
SCRN1-203ENST00000409570 ITPK1Q13572 414 aa23.55■■□□□ 1.36
SCRN1-203ENST00000409570 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
SCRN1-203ENST00000409570 EYA1Q99502 592 aa23.54■■□□□ 1.36
SCRN1-203ENST00000409570 TMOD3Q9NYL9 352 aa23.54■■□□□ 1.36
SCRN1-203ENST00000409570 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
SCRN1-203ENST00000409570 WASHC2AQ641Q2 1341 aa23.54■■□□□ 1.36
SCRN1-203ENST00000409570 PPM1GO15355 546 aaPredicted RBP23.53■■□□□ 1.36
SCRN1-203ENST00000409570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.53■■□□□ 1.36
SCRN1-203ENST00000409570 GNPATO15228 680 aa23.52■■□□□ 1.36
SCRN1-203ENST00000409570 KIF3CO14782 793 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms