RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 BAG6P46379 1132 aa25.82■■□□□ 1.72
PPM1B-207ENST00000409486 PTF1AQ7RTS3 328 aa25.81■■□□□ 1.72
PPM1B-207ENST00000409486 SHANK3Q9BYB0 1731 aa25.81■■□□□ 1.72
PPM1B-207ENST00000409486 AEBP1Q8IUX7 1158 aa25.79■■□□□ 1.72
PPM1B-207ENST00000409486 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
PPM1B-207ENST00000409486 KCNQ2O43526 872 aa25.77■■□□□ 1.72
PPM1B-207ENST00000409486 PPP2R1AP30153 589 aa25.76■■□□□ 1.71
PPM1B-207ENST00000409486 IL13P35225 146 aa25.76■■□□□ 1.71
PPM1B-207ENST00000409486 SULT6B1Q6IMI4 303 aa25.76■■□□□ 1.71
PPM1B-207ENST00000409486 IGSF1Q8N6C5 1336 aa25.75■■□□□ 1.71
PPM1B-207ENST00000409486 U2SURPO15042 1029 aaKnown RBP25.75■■□□□ 1.71
PPM1B-207ENST00000409486 DIAPH1O60610 1272 aaKnown RBP25.75■■□□□ 1.71
PPM1B-207ENST00000409486 HMOX1P09601 288 aa25.75■■□□□ 1.71
PPM1B-207ENST00000409486 EZH2Q15910 746 aaKnown RBP25.75■■□□□ 1.71
PPM1B-207ENST00000409486 DOT1LQ8TEK3 1739 aa25.75■■□□□ 1.71
PPM1B-207ENST00000409486 ZNF316A6NFI3 1004 aaPredicted RBP25.73■■□□□ 1.71
PPM1B-207ENST00000409486 PCDH11XQ9BZA7 1347 aa25.73■■□□□ 1.71
PPM1B-207ENST00000409486 PCDH11YQ9BZA8 1340 aa25.73■■□□□ 1.71
PPM1B-207ENST00000409486 CFAP53Q96M91 514 aa25.72■■□□□ 1.71
PPM1B-207ENST00000409486 NCAPD2Q15021 1401 aa25.72■■□□□ 1.71
PPM1B-207ENST00000409486 PKD1L3Q7Z443 1732 aa25.72■■□□□ 1.71
PPM1B-207ENST00000409486 BCL11BQ9C0K0 894 aaPredicted RBP25.72■■□□□ 1.71
PPM1B-207ENST00000409486 SPG7Q9UQ90 795 aa25.72■■□□□ 1.71
PPM1B-207ENST00000409486 NHSQ6T4R5 1651 aa25.71■■□□□ 1.71
PPM1B-207ENST00000409486 CYP27B1O15528 508 aa25.68■■□□□ 1.7
PPM1B-207ENST00000409486 PRIM1P49642 420 aaKnown RBP25.68■■□□□ 1.7
PPM1B-207ENST00000409486 COL3A1P02461 1466 aaPredicted RBP25.68■■□□□ 1.7
PPM1B-207ENST00000409486 BTAF1O14981 1849 aa25.67■■□□□ 1.7
PPM1B-207ENST00000409486 PARD3Q8TEW0 1356 aa25.67■■□□□ 1.7
PPM1B-207ENST00000409486 ZNF530Q6P9A1 599 aaPredicted RBP25.65■■□□□ 1.7
PPM1B-207ENST00000409486 CAMKK2Q96RR4 588 aa25.65■■□□□ 1.7
PPM1B-207ENST00000409486 BCL9O00512 1426 aa25.65■■□□□ 1.7
PPM1B-207ENST00000409486 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.69
PPM1B-207ENST00000409486 TOGARAM1Q9Y4F4 1720 aa25.62■■□□□ 1.69
PPM1B-207ENST00000409486 PSDA5PKW4 1024 aaPredicted RBP25.61■■□□□ 1.69
PPM1B-207ENST00000409486 MPRIPQ6WCQ1 1025 aa25.61■■□□□ 1.69
PPM1B-207ENST00000409486 U2AF1L5P0DN76 240 aaPredicted RBP25.6■■□□□ 1.69
PPM1B-207ENST00000409486 PHKG2P15735 406 aa25.6■■□□□ 1.69
PPM1B-207ENST00000409486 U2AF1Q01081 240 aaKnown RBP eCLIP25.6■■□□□ 1.69
PPM1B-207ENST00000409486 IFNL2Q8IZJ0 200 aa25.6■■□□□ 1.69
PPM1B-207ENST00000409486 RALBP1Q15311 655 aa25.6■■□□□ 1.69
PPM1B-207ENST00000409486 C1orf141Q5JVX7 400 aa25.6■■□□□ 1.69
PPM1B-207ENST00000409486 NUDCQ9Y266 331 aa25.6■■□□□ 1.69
PPM1B-207ENST00000409486 NUP188Q5SRE5 1749 aa25.59■■□□□ 1.69
PPM1B-207ENST00000409486 RREB1Q92766 1687 aa25.59■■□□□ 1.69
PPM1B-207ENST00000409486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.58■■□□□ 1.694e-6■□□□□ 8.7
PPM1B-207ENST00000409486 KDRP35968 1356 aa25.58■■□□□ 1.69
PPM1B-207ENST00000409486 ITGB4P16144 1822 aa25.58■■□□□ 1.68
PPM1B-207ENST00000409486 AMOTQ4VCS5 1084 aa25.57■■□□□ 1.68
PPM1B-207ENST00000409486 KCNQ4P56696 695 aa25.55■■□□□ 1.68
PPM1B-207ENST00000409486 R3HDM1Q15032 1099 aaKnown RBP25.55■■□□□ 1.68
PPM1B-207ENST00000409486 PLSCR1O15162 318 aa25.54■■□□□ 1.68
PPM1B-207ENST00000409486 TXNRD1Q16881 649 aa25.54■■□□□ 1.68
PPM1B-207ENST00000409486 MYBBP1AQ9BQG0 1328 aaKnown RBP25.54■■□□□ 1.68
PPM1B-207ENST00000409486 PRKAR2BP31323 418 aa25.53■■□□□ 1.68
PPM1B-207ENST00000409486 RGPD3A6NKT7 1758 aaPredicted RBP25.53■■□□□ 1.68
PPM1B-207ENST00000409486 RGPD4Q7Z3J3 1758 aa25.53■■□□□ 1.68
PPM1B-207ENST00000409486 MTHFSDQ2M296 383 aaKnown RBP25.52■■□□□ 1.68
PPM1B-207ENST00000409486 PROM2Q8N271 834 aa25.52■■□□□ 1.68
PPM1B-207ENST00000409486 TMOD3Q9NYL9 352 aa25.52■■□□□ 1.68
PPM1B-207ENST00000409486 NKX1-1Q15270 411 aaPredicted RBP25.51■■□□□ 1.67
PPM1B-207ENST00000409486 NBPF14Q5TI25 921 aa25.51■■□□□ 1.67
PPM1B-207ENST00000409486 PRKRIP1Q9H875 184 aaPredicted RBP25.5■■□□□ 1.67
PPM1B-207ENST00000409486 HSP90AB1P08238 724 aaKnown RBP25.49■■□□□ 1.67
PPM1B-207ENST00000409486 PIGBQ92521 554 aa25.49■■□□□ 1.67
PPM1B-207ENST00000409486 KDM6AO15550 1401 aaPredicted RBP25.48■■□□□ 1.67
PPM1B-207ENST00000409486 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
PPM1B-207ENST00000409486 CABP4P57796 275 aa25.47■■□□□ 1.67
PPM1B-207ENST00000409486 DCAF5Q96JK2 942 aa25.47■■□□□ 1.67
PPM1B-207ENST00000409486 ANO8Q9HCE9 1232 aaPredicted RBP25.47■■□□□ 1.67
PPM1B-207ENST00000409486 VIRMAQ69YN4 1812 aaKnown RBP25.47■■□□□ 1.67
PPM1B-207ENST00000409486 AKAP4Q5JQC9 854 aa25.47■■□□□ 1.67
PPM1B-207ENST00000409486 PHACTR3Q96KR7 559 aa25.47■■□□□ 1.67
PPM1B-207ENST00000409486 PALLDQ8WX93 1383 aa25.45■■□□□ 1.66
PPM1B-207ENST00000409486 LGR6Q9HBX8 967 aa25.45■■□□□ 1.66
PPM1B-207ENST00000409486 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.66
PPM1B-207ENST00000409486 CCNL1Q9UK58 526 aaPredicted RBP25.45■■□□□ 1.66
PPM1B-207ENST00000409486 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
PPM1B-207ENST00000409486 ASAP1Q9ULH1 1129 aa25.44■■□□□ 1.66
PPM1B-207ENST00000409486 LY75O60449 1722 aa25.44■■□□□ 1.66
PPM1B-207ENST00000409486 SCN11AQ9UI33 1791 aa25.43■■□□□ 1.66
PPM1B-207ENST00000409486 STK32BQ9NY57 414 aa25.43■■□□□ 1.66
PPM1B-207ENST00000409486 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
PPM1B-207ENST00000409486 ERVV-2B6SEH9 535 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 ANP32CO43423 234 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 FCHSD2O94868 740 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 NEFMP07197 916 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 NFATC2IPQ8NCF5 419 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 MAP3K5Q99683 1374 aa25.4■■□□□ 1.66
PPM1B-207ENST00000409486 RNMTO43148 476 aaKnown RBP25.4■■□□□ 1.66
PPM1B-207ENST00000409486 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
PPM1B-207ENST00000409486 RBM42Q9BTD8 480 aaKnown RBP25.4■■□□□ 1.66
PPM1B-207ENST00000409486 SMARCC1Q92922 1105 aaPredicted RBP25.39■■□□□ 1.65
PPM1B-207ENST00000409486 GNAT3A8MTJ3 354 aa25.38■■□□□ 1.65
PPM1B-207ENST00000409486 ZNF827Q17R98 1081 aa25.38■■□□□ 1.65
PPM1B-207ENST00000409486 SLC27A3Q5K4L6 730 aa25.38■■□□□ 1.65
PPM1B-207ENST00000409486 ATG3Q9NT62 314 aa25.38■■□□□ 1.65
PPM1B-207ENST00000409486 CCDC146Q8IYE0 955 aa25.37■■□□□ 1.65
PPM1B-207ENST00000409486 MAPK8IP3Q9UPT6 1336 aa25.36■■□□□ 1.65
PPM1B-207ENST00000409486 PAPPAQ13219 1627 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms