RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 NEFMP07197 916 aa11.82□□□□□ -0.52
VWA3B-201ENST00000409460 BCL9O00512 1426 aa11.81□□□□□ -0.52
VWA3B-201ENST00000409460 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
VWA3B-201ENST00000409460 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
VWA3B-201ENST00000409460 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
VWA3B-201ENST00000409460 FLT4P35916 1363 aa11.81□□□□□ -0.52
VWA3B-201ENST00000409460 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
VWA3B-201ENST00000409460 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
VWA3B-201ENST00000409460 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
VWA3B-201ENST00000409460 MORC1Q86VD1 984 aa11.79□□□□□ -0.52
VWA3B-201ENST00000409460 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
VWA3B-201ENST00000409460 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
VWA3B-201ENST00000409460 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
VWA3B-201ENST00000409460 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
VWA3B-201ENST00000409460 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.52
VWA3B-201ENST00000409460 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.52
VWA3B-201ENST00000409460 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
VWA3B-201ENST00000409460 MIER1Q8N108 512 aa11.76□□□□□ -0.53
VWA3B-201ENST00000409460 WASHC2AQ641Q2 1341 aa11.76□□□□□ -0.53
VWA3B-201ENST00000409460 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
VWA3B-201ENST00000409460 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
VWA3B-201ENST00000409460 INSRP06213 1382 aa11.75□□□□□ -0.53
VWA3B-201ENST00000409460 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
VWA3B-201ENST00000409460 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
VWA3B-201ENST00000409460 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
VWA3B-201ENST00000409460 LMO7Q8WWI1 1683 aa11.74□□□□□ -0.53
VWA3B-201ENST00000409460 NPHP1O15259 732 aa11.74□□□□□ -0.53
VWA3B-201ENST00000409460 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
VWA3B-201ENST00000409460 FYB1O15117 783 aa11.74□□□□□ -0.53
VWA3B-201ENST00000409460 CABP4P57796 275 aa11.74□□□□□ -0.53
VWA3B-201ENST00000409460 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
VWA3B-201ENST00000409460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
VWA3B-201ENST00000409460 USHBP1Q8N6Y0 703 aa11.73□□□□□ -0.53
VWA3B-201ENST00000409460 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
VWA3B-201ENST00000409460 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
VWA3B-201ENST00000409460 DEKP35659 375 aaKnown RBP11.72□□□□□ -0.53
VWA3B-201ENST00000409460 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
VWA3B-201ENST00000409460 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
VWA3B-201ENST00000409460 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
VWA3B-201ENST00000409460 NSD2O96028 1365 aa11.71□□□□□ -0.53
VWA3B-201ENST00000409460 PHF14O94880 888 aa11.71□□□□□ -0.54
VWA3B-201ENST00000409460 ATP6V1AP38606 617 aa11.71□□□□□ -0.54
VWA3B-201ENST00000409460 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.54
VWA3B-201ENST00000409460 PALLDQ8WX93 1383 aa11.71□□□□□ -0.54
VWA3B-201ENST00000409460 TESK2Q96S53 571 aa11.71□□□□□ -0.54
VWA3B-201ENST00000409460 NBPF6Q5VWK0 638 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 NBPF4Q96M43 638 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 PIK3C2AO00443 1686 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 RFC4P35249 363 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 NFAT5O94916 1531 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
VWA3B-201ENST00000409460 RBM19Q9Y4C8 960 aaKnown RBP11.7□□□□□ -0.54
VWA3B-201ENST00000409460 CRYBG1Q9Y4K1 1723 aa11.69□□□□□ -0.54
VWA3B-201ENST00000409460 SSFA2P28290 1259 aa11.69□□□□□ -0.54
VWA3B-201ENST00000409460 GNPATO15228 680 aa11.69□□□□□ -0.54
VWA3B-201ENST00000409460 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
VWA3B-201ENST00000409460 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 MTHFSP49914 203 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
VWA3B-201ENST00000409460 PODXL2Q9NZ53 605 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 MSL1Q68DK7 614 aa11.68□□□□□ -0.54
VWA3B-201ENST00000409460 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
VWA3B-201ENST00000409460 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
VWA3B-201ENST00000409460 ADRA2BP18089 450 aa11.67□□□□□ -0.54
VWA3B-201ENST00000409460 ERVV-2B6SEH9 535 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 ZPR1O75312 459 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 MAP3K5Q99683 1374 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 LOC102724428A0A0B4J2F2 783 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 SIK1P57059 783 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 PROM2Q8N271 834 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
VWA3B-201ENST00000409460 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 CD163L1Q9NR16 1453 aa11.66□□□□□ -0.54
VWA3B-201ENST00000409460 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
VWA3B-201ENST00000409460 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
VWA3B-201ENST00000409460 PANK3Q9H999 370 aa11.65□□□□□ -0.54
VWA3B-201ENST00000409460 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.55
VWA3B-201ENST00000409460 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 A0A087WZG4 1122 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
VWA3B-201ENST00000409460 RGPD3A6NKT7 1758 aaPredicted RBP11.64□□□□□ -0.55
VWA3B-201ENST00000409460 RGPD4Q7Z3J3 1758 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
VWA3B-201ENST00000409460 PTGER2P43116 358 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 TEFQ10587 303 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 PTF1AQ7RTS3 328 aa11.64□□□□□ -0.55
VWA3B-201ENST00000409460 ZNF784Q8NCA9 323 aaPredicted RBP11.63□□□□□ -0.55
VWA3B-201ENST00000409460 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
VWA3B-201ENST00000409460 RREB1Q92766 1687 aa11.63□□□□□ -0.55
VWA3B-201ENST00000409460 RTF1Q92541 710 aaKnown RBP11.62□□□□□ -0.55
VWA3B-201ENST00000409460 EYA1Q99502 592 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms