RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 NGDNQ8NEJ9 315 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 RGS12O14924 1447 aa13.3□□□□□ -0.28
NIF3L1-204ENST00000409357 RXRBP28702 533 aa13.3□□□□□ -0.28
NIF3L1-204ENST00000409357 SNX21Q969T3 373 aa13.3□□□□□ -0.28
NIF3L1-204ENST00000409357 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
NIF3L1-204ENST00000409357 USP21Q9UK80 565 aa13.3□□□□□ -0.28
NIF3L1-204ENST00000409357 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 POLR3AO14802 1390 aaPredicted RBP13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 SRPK2P78362 688 aaKnown RBP13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 SLIT2O94813 1529 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 ATRNO75882 1429 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 PPIP5K1Q6PFW1 1433 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 ACEP12821 1306 aa13.29□□□□□ -0.28
NIF3L1-204ENST00000409357 NOL7Q9UMY1 257 aaKnown RBP13.28□□□□□ -0.28
NIF3L1-204ENST00000409357 PHRF1Q9P1Y6 1649 aaKnown RBP13.28□□□□□ -0.28
NIF3L1-204ENST00000409357 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
NIF3L1-204ENST00000409357 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
NIF3L1-204ENST00000409357 CDK12Q9NYV4 1490 aaPredicted RBP13.27□□□□□ -0.28
NIF3L1-204ENST00000409357 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 IGHDP01880 384 aa13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
NIF3L1-204ENST00000409357 NRAPQ86VF7 1730 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 GLI3P10071 1580 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 GZF1Q9H116 711 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-204ENST00000409357 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-204ENST00000409357 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-204ENST00000409357 RBM6P78332 1123 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-204ENST00000409357 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
NIF3L1-204ENST00000409357 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 AKAP12Q02952 1782 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 ZNF445P59923 1031 aa13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-204ENST00000409357 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 E9PSI1 815 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 RAB3GAP1Q15042 981 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 PIK3C2AO00443 1686 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
NIF3L1-204ENST00000409357 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
NIF3L1-204ENST00000409357 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
NIF3L1-204ENST00000409357 HSCBQ8IWL3 235 aa13.21□□□□□ -0.29
NIF3L1-204ENST00000409357 USP6P35125 1406 aa13.21□□□□□ -0.29
NIF3L1-204ENST00000409357 UQCRHLA0A096LP55 91 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 UQCRHP07919 91 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 KLHL40Q2TBA0 621 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 SBNO2Q9Y2G9 1366 aa13.21□□□□□ -0.3
NIF3L1-204ENST00000409357 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
NIF3L1-204ENST00000409357 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
NIF3L1-204ENST00000409357 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
NIF3L1-204ENST00000409357 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
NIF3L1-204ENST00000409357 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
NIF3L1-204ENST00000409357 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-204ENST00000409357 ZKSCAN5Q9Y2L8 839 aa13.19□□□□□ -0.3
NIF3L1-204ENST00000409357 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
NIF3L1-204ENST00000409357 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 PROM2Q8N271 834 aa13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 CANXP27824 592 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-204ENST00000409357 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
NIF3L1-204ENST00000409357 TESK2Q96S53 571 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms