RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
SHANK2-203ENST00000409161 NEBLO76041 1014 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 MCM4P33991 863 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 HOOK3Q86VS8 718 aa14.18□□□□□ -0.14
SHANK2-203ENST00000409161 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
SHANK2-203ENST00000409161 NECTIN2Q92692 538 aa14.17□□□□□ -0.14
SHANK2-203ENST00000409161 ANO10Q9NW15 660 aa14.17□□□□□ -0.14
SHANK2-203ENST00000409161 ALS2CR12Q96Q35 445 aa14.17□□□□□ -0.14
SHANK2-203ENST00000409161 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
SHANK2-203ENST00000409161 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHANK2-203ENST00000409161 V9GYY5 206 aaPredicted RBP14.17□□□□□ -0.14
SHANK2-203ENST00000409161 SEPT11Q9NVA2 429 aaKnown RBP14.17□□□□□ -0.14
SHANK2-203ENST00000409161 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
SHANK2-203ENST00000409161 PAXBP1Q9Y5B6 917 aa14.16□□□□□ -0.14
SHANK2-203ENST00000409161 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-203ENST00000409161 PAFAH1B1P43034 410 aa14.16□□□□□ -0.14
SHANK2-203ENST00000409161 SREK1Q8WXA9 508 aaKnown RBP14.16□□□□□ -0.14
SHANK2-203ENST00000409161 TIGD1Q96MW7 591 aa14.16□□□□□ -0.14
SHANK2-203ENST00000409161 ZNF287Q9HBT7 754 aa14.16□□□□□ -0.14
SHANK2-203ENST00000409161 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
SHANK2-203ENST00000409161 FGD6Q6ZV73 1430 aa14.15□□□□□ -0.14
SHANK2-203ENST00000409161 HMGB2P26583 209 aaKnown RBP14.15□□□□□ -0.14
SHANK2-203ENST00000409161 TSG101Q99816 390 aa14.15□□□□□ -0.14
SHANK2-203ENST00000409161 MSH5O43196 834 aa14.15□□□□□ -0.14
SHANK2-203ENST00000409161 PRIMPOLQ96LW4 560 aa14.15□□□□□ -0.14
SHANK2-203ENST00000409161 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
SHANK2-203ENST00000409161 ATP2B1P20020 1258 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 PYM1Q9BRP8 204 aaKnown RBP14.14□□□□□ -0.15
SHANK2-203ENST00000409161 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 CTR9Q6PD62 1173 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 CCDC150Q8NCX0 1101 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-203ENST00000409161 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
SHANK2-203ENST00000409161 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 GSTTP1A0A1W2PQM5 241 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 ANKS4BQ8N8V4 417 aa14.14□□□□□ -0.15
SHANK2-203ENST00000409161 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 KIF20AO95235 890 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
SHANK2-203ENST00000409161 RAB34Q9BZG1 259 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
SHANK2-203ENST00000409161 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 PDRG1Q9NUG6 133 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 CCDC196A0A1B0GTZ2 297 aa14.13□□□□□ -0.15
SHANK2-203ENST00000409161 SMARCC1Q92922 1105 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-203ENST00000409161 UBAC1Q9BSL1 405 aa14.12□□□□□ -0.15
SHANK2-203ENST00000409161 TOP1P11387 765 aaKnown RBP14.12□□□□□ -0.15
SHANK2-203ENST00000409161 NSRP1Q9H0G5 558 aaKnown RBP14.12□□□□□ -0.15
SHANK2-203ENST00000409161 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
SHANK2-203ENST00000409161 DHX29Q7Z478 1369 aaKnown RBP14.12□□□□□ -0.15
SHANK2-203ENST00000409161 CHD1LQ86WJ1 897 aa14.12□□□□□ -0.15
SHANK2-203ENST00000409161 TNIP1Q15025 636 aa14.12□□□□□ -0.15
SHANK2-203ENST00000409161 CEP112Q8N8E3 955 aa14.12□□□□□ -0.15
SHANK2-203ENST00000409161 HSPA4P34932 840 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 TICAM2Q86XR7 235 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 FERMT1Q9BQL6 677 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 ZHX3Q9H4I2 956 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 SYCE3A1L190 88 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
SHANK2-203ENST00000409161 CCDC113Q9H0I3 377 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
SHANK2-203ENST00000409161 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 FSD2A1L4K1 749 aa14.11□□□□□ -0.15
SHANK2-203ENST00000409161 TUBB4AP04350 444 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 IFI16Q16666 785 aaKnown RBP14.1□□□□□ -0.15
SHANK2-203ENST00000409161 HMGB1P09429 215 aaKnown RBP14.1□□□□□ -0.15
SHANK2-203ENST00000409161 BMS1Q14692 1282 aaKnown RBP14.1□□□□□ -0.15
SHANK2-203ENST00000409161 RNF187Q5TA31 235 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-203ENST00000409161 DAAM2Q86T65 1068 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 FERP16591 822 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
SHANK2-203ENST00000409161 CNNM1Q9NRU3 951 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 YEATS4O95619 227 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 KIF4BQ2VIQ3 1234 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 CLIP2Q9UDT6 1046 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 CETN1Q12798 172 aa14.1□□□□□ -0.15
SHANK2-203ENST00000409161 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 FAM114A1Q8IWE2 563 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 DDX23Q9BUQ8 820 aaKnown RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 PLVAPQ9BX97 442 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 DNAAF4Q8WXU2 420 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 SEC63Q9UGP8 760 aaKnown RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 SSR1P43307 286 aaKnown RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 MNAT1P51948 309 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
SHANK2-203ENST00000409161 HMOX1P09601 288 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
SHANK2-203ENST00000409161 CCDC171Q6TFL3 1326 aa14.08□□□□□ -0.15
SHANK2-203ENST00000409161 STX1AQ16623 288 aa14.08□□□□□ -0.15
SHANK2-203ENST00000409161 DDX46Q7L014 1031 aaKnown RBP14.08□□□□□ -0.15
SHANK2-203ENST00000409161 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms