RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ATAD2BQ9ULI0 1458 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 AACSQ86V21 672 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
SMCR8-201ENST00000406438 SPATA32Q96LK8 384 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
SMCR8-201ENST00000406438 SLC26A8Q96RN1 970 aa14.13□□□□□ -0.15
SMCR8-201ENST00000406438 K7ELQ4 463 aaPredicted RBP14.12□□□□□ -0.15
SMCR8-201ENST00000406438 FAM193AP78312 1265 aa14.12□□□□□ -0.15
SMCR8-201ENST00000406438 EHBP1L1Q8N3D4 1523 aa14.12□□□□□ -0.15
SMCR8-201ENST00000406438 CCDC148Q8NFR7 591 aa14.12□□□□□ -0.15
SMCR8-201ENST00000406438 EIF5P55010 431 aaKnown RBP14.12□□□□□ -0.15
SMCR8-201ENST00000406438 PPP4R3AQ6IN85 833 aa14.12□□□□□ -0.15
SMCR8-201ENST00000406438 WDHD1O75717 1129 aaPredicted RBP14.12□□□□□ -0.15
SMCR8-201ENST00000406438 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
SMCR8-201ENST00000406438 USP5P45974 858 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 SULT6B1Q6IMI4 303 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 CCDC150Q8NCX0 1101 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 ZNF652Q9Y2D9 606 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 USP8P40818 1118 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 TMOD2Q9NZR1 351 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 PDZRN3Q9UPQ7 1066 aa14.11□□□□□ -0.15
SMCR8-201ENST00000406438 TAF4BQ92750 862 aa14.1□□□□□ -0.15
SMCR8-201ENST00000406438 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
SMCR8-201ENST00000406438 IMMTQ16891 758 aaKnown RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 NUTM2BA6NNL0 878 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 NUTM2EB1AL46 878 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 PLEKHH2Q8IVE3 1493 aa14.1□□□□□ -0.15
SMCR8-201ENST00000406438 IBSPP21815 317 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 ZNF530Q6P9A1 599 aaPredicted RBP14.1□□□□□ -0.15
SMCR8-201ENST00000406438 STARD3NLO95772 234 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 UPF3BQ9BZI7 483 aaKnown RBP14.09□□□□□ -0.15
SMCR8-201ENST00000406438 PDRG1Q9NUG6 133 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 SPDYE4A6NLX3 237 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 RAI14Q9P0K7 980 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 SRGAP3O43295 1099 aa14.09□□□□□ -0.15
SMCR8-201ENST00000406438 PPP2R1AP30153 589 aa14.08□□□□□ -0.15
SMCR8-201ENST00000406438 CEP126Q9P2H0 1117 aa14.08□□□□□ -0.15
SMCR8-201ENST00000406438 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.15
SMCR8-201ENST00000406438 NUP62CLQ9H1M0 184 aa14.08□□□□□ -0.16
SMCR8-201ENST00000406438 DYDC1Q8WWB3 177 aa14.08□□□□□ -0.16
SMCR8-201ENST00000406438 STAMBPO95630 424 aa14.08□□□□□ -0.16
SMCR8-201ENST00000406438 FGFR1OPO95684 399 aaKnown RBP14.08□□□□□ -0.16
SMCR8-201ENST00000406438 CHD1LQ86WJ1 897 aa14.08□□□□□ -0.16
SMCR8-201ENST00000406438 AIDAQ96BJ3 306 aa14.08□□□□□ -0.16
SMCR8-201ENST00000406438 VPS36Q86VN1 386 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 ZSCAN31Q96LW9 406 aaPredicted RBP14.07□□□□□ -0.16
SMCR8-201ENST00000406438 MAP2K1Q02750 393 aaPredicted RBP14.07□□□□□ -0.16
SMCR8-201ENST00000406438 MAP9Q49MG5 647 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
SMCR8-201ENST00000406438 ARHGAP29Q52LW3 1261 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 GOLGA6L10A0A0M3HER8 536 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 CASTP20810 708 aaKnown RBP14.07□□□□□ -0.16
SMCR8-201ENST00000406438 ATF7IPQ6VMQ6 1270 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 MCM3P25205 808 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 SPA17Q15506 151 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 TSG101Q99816 390 aa14.07□□□□□ -0.16
SMCR8-201ENST00000406438 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 AKAP2Q9Y2D5 859 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 CCDC102AQ96A19 550 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 RTEL1-TNFRSF6BF6WH68 1400 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 SCLT1Q96NL6 688 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
SMCR8-201ENST00000406438 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 ZPR1O75312 459 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 CFAP100Q494V2 611 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 CAVIN4Q5BKX8 364 aa14.06□□□□□ -0.16
SMCR8-201ENST00000406438 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
SMCR8-201ENST00000406438 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
SMCR8-201ENST00000406438 TAF3Q5VWG9 929 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 CRACR2AQ9BSW2 395 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 C9orf84Q5VXU9 1444 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 IDH1O75874 414 aaKnown RBP14.05□□□□□ -0.16
SMCR8-201ENST00000406438 RAB34Q9BZG1 259 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 HFM1A2PYH4 1435 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 CCDC196A0A1B0GTZ2 297 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 ANKIB1Q9P2G1 1089 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
SMCR8-201ENST00000406438 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
SMCR8-201ENST00000406438 NF2P35240 595 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 MVPQ14764 893 aaKnown RBP14.04□□□□□ -0.16
SMCR8-201ENST00000406438 MAP3K11Q16584 847 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 DRC1Q96MC2 740 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 MKNK2Q9HBH9 465 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 BCAR3O75815 825 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
SMCR8-201ENST00000406438 CASQ1P31415 396 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms