RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 MCM5P33992 734 aa15.75■□□□□ 0.11
SNED1-205ENST00000405547 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 SSH1Q8WYL5 1049 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
SNED1-205ENST00000405547 DUSP27Q5VZP5 1158 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 CASTP20810 708 aaKnown RBP15.74■□□□□ 0.11
SNED1-205ENST00000405547 NUTM2GQ5VZR2 741 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
SNED1-205ENST00000405547 CTNNA3Q9UI47 895 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 CTDP1Q9Y5B0 961 aaPredicted RBP15.73■□□□□ 0.11
SNED1-205ENST00000405547 ATP2B1P20020 1258 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 TTC39AQ5SRH9 613 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 AACSQ86V21 672 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 MPNDQ8N594 471 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 SCAND2PQ9GZW5 306 aaPredicted RBP15.73■□□□□ 0.11
SNED1-205ENST00000405547 ATF3P18847 181 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
SNED1-205ENST00000405547 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
SNED1-205ENST00000405547 ERLIN2O94905 339 aa15.72■□□□□ 0.11
SNED1-205ENST00000405547 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
SNED1-205ENST00000405547 TNPO1Q92973 898 aaKnown RBP15.72■□□□□ 0.11
SNED1-205ENST00000405547 SH2B1Q9NRF2 756 aaPredicted RBP15.72■□□□□ 0.11
SNED1-205ENST00000405547 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
SNED1-205ENST00000405547 CALRP27797 417 aaKnown RBP15.72■□□□□ 0.11
SNED1-205ENST00000405547 NACAP1Q9BZK3 213 aa15.72■□□□□ 0.11
SNED1-205ENST00000405547 HSP90AB2PQ58FF8 381 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 FILIP1Q7Z7B0 1213 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 CCAR1Q8IX12 1150 aaKnown RBP15.71■□□□□ 0.11
SNED1-205ENST00000405547 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 UBXN4Q92575 508 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 MAP4K4O95819 1239 aaPredicted RBP15.71■□□□□ 0.11
SNED1-205ENST00000405547 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 ABCC5O15440 1437 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 FYB1O15117 783 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 KIAA0754O94854 1291 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 CYB5RLQ6IPT4 315 aa15.71■□□□□ 0.11
SNED1-205ENST00000405547 PTPN14Q15678 1187 aa15.71■□□□□ 0.1
SNED1-205ENST00000405547 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
SNED1-205ENST00000405547 TSPYL1Q9H0U9 437 aa15.7■□□□□ 0.1
SNED1-205ENST00000405547 BMP2KLQ5H9B9 411 aa15.7■□□□□ 0.1
SNED1-205ENST00000405547 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
SNED1-205ENST00000405547 MX1P20591 662 aa15.7■□□□□ 0.1
SNED1-205ENST00000405547 ARHGEF11O15085 1522 aa15.7■□□□□ 0.1
SNED1-205ENST00000405547 SIL1Q9H173 461 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 CCDC69A6NI79 296 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 FAM177A1Q8N128 213 aaPredicted RBP15.69■□□□□ 0.1
SNED1-205ENST00000405547 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
SNED1-205ENST00000405547 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 CTAGE5O15320 804 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 SFPQP23246 707 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNED1-205ENST00000405547 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
SNED1-205ENST00000405547 EXOC6BQ9Y2D4 811 aa15.69■□□□□ 0.1
SNED1-205ENST00000405547 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
SNED1-205ENST00000405547 CCDC181Q5TID7 509 aa15.68■□□□□ 0.1
SNED1-205ENST00000405547 USP8P40818 1118 aa15.68■□□□□ 0.1
SNED1-205ENST00000405547 DEF6Q9H4E7 631 aa15.68■□□□□ 0.1
SNED1-205ENST00000405547 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
SNED1-205ENST00000405547 ANO10Q9NW15 660 aa15.68■□□□□ 0.1
SNED1-205ENST00000405547 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 NOL7Q9UMY1 257 aaKnown RBP15.67■□□□□ 0.1
SNED1-205ENST00000405547 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 TXNDC2Q86VQ3 553 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 WASF1Q92558 559 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 TRIM27P14373 513 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 NSD2O96028 1365 aa15.67■□□□□ 0.1
SNED1-205ENST00000405547 TATP17735 454 aaPredicted RBP15.66■□□□□ 0.1
SNED1-205ENST00000405547 MAPKBP1O60336 1514 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 TMCO3Q6UWJ1 677 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 GNAT3A8MTJ3 354 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 NEMFO60524 1076 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 ZNF530Q6P9A1 599 aaPredicted RBP15.66■□□□□ 0.1
SNED1-205ENST00000405547 GBP3Q9H0R5 595 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 SCAF11Q99590 1463 aaKnown RBP15.66■□□□□ 0.1
SNED1-205ENST00000405547 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 PTPRCP08575 1304 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 ZSCAN12O43309 604 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 CFAP100Q494V2 611 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 DYNC1I1O14576 645 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 KDM4AO75164 1064 aa15.66■□□□□ 0.1
SNED1-205ENST00000405547 KLHL40Q2TBA0 621 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 EPB41L2O43491 1005 aaKnown RBP15.65■□□□□ 0.1
SNED1-205ENST00000405547 CAVIN2O95810 425 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 RRS1Q15050 365 aaKnown RBP15.65■□□□□ 0.1
SNED1-205ENST00000405547 LIMCH1Q9UPQ0 1083 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 ZFYVE27Q5T4F4 411 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 SSFA2P28290 1259 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 ASXL1Q8IXJ9 1541 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 SYCP1Q15431 976 aa15.65■□□□□ 0.1
SNED1-205ENST00000405547 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.1
SNED1-205ENST00000405547 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms