RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 GSPT1P15170 499 aaKnown RBP19.53■□□□□ 0.72
TOM1-203ENST00000404284 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
TOM1-203ENST00000404284 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
TOM1-203ENST00000404284 MCM10Q7L590 875 aa19.52■□□□□ 0.71
TOM1-203ENST00000404284 PLEKHM2Q8IWE5 1019 aa19.52■□□□□ 0.71
TOM1-203ENST00000404284 RRP9O43818 475 aaKnown RBP19.51■□□□□ 0.71
TOM1-203ENST00000404284 CD2BP2O95400 341 aaKnown RBP19.51■□□□□ 0.71
TOM1-203ENST00000404284 HSP90AB2PQ58FF8 381 aa19.51■□□□□ 0.71
TOM1-203ENST00000404284 PLEKHG1Q9ULL1 1385 aa19.51■□□□□ 0.71
TOM1-203ENST00000404284 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
TOM1-203ENST00000404284 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
TOM1-203ENST00000404284 CDC45O75419 566 aa19.51■□□□□ 0.71
TOM1-203ENST00000404284 CRB1P82279 1406 aa19.5■□□□□ 0.71
TOM1-203ENST00000404284 TRAK2O60296 914 aa19.5■□□□□ 0.71
TOM1-203ENST00000404284 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
TOM1-203ENST00000404284 MSH6P52701 1360 aa19.49■□□□□ 0.71
TOM1-203ENST00000404284 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
TOM1-203ENST00000404284 CIZ1Q9ULV3 898 aaPredicted RBP19.49■□□□□ 0.71
TOM1-203ENST00000404284 PTPRUQ92729 1446 aa19.49■□□□□ 0.71
TOM1-203ENST00000404284 FMN2Q9NZ56 1722 aa19.49■□□□□ 0.71
TOM1-203ENST00000404284 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
TOM1-203ENST00000404284 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
TOM1-203ENST00000404284 LTKP29376 864 aa19.49■□□□□ 0.71
TOM1-203ENST00000404284 DDX11L8A8MPP1 907 aa19.48■□□□□ 0.71
TOM1-203ENST00000404284 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
TOM1-203ENST00000404284 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
TOM1-203ENST00000404284 GZF1Q9H116 711 aaPredicted RBP19.47■□□□□ 0.71
TOM1-203ENST00000404284 PTPRCP08575 1304 aa19.47■□□□□ 0.71
TOM1-203ENST00000404284 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
TOM1-203ENST00000404284 TTC22Q5TAA0 569 aa19.47■□□□□ 0.71
TOM1-203ENST00000404284 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
TOM1-203ENST00000404284 RIMS1Q86UR5 1692 aaKnown RBP19.47■□□□□ 0.71
TOM1-203ENST00000404284 GOLGA6L3A6NEY3 463 aa19.46■□□□□ 0.71
TOM1-203ENST00000404284 K7ELQ4 463 aaPredicted RBP19.46■□□□□ 0.71
TOM1-203ENST00000404284 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
TOM1-203ENST00000404284 RPAP2Q8IXW5 612 aaPredicted RBP19.46■□□□□ 0.71
TOM1-203ENST00000404284 TNPO1Q92973 898 aaKnown RBP19.46■□□□□ 0.71
TOM1-203ENST00000404284 MAP3K19Q56UN5 1328 aa19.45■□□□□ 0.7
TOM1-203ENST00000404284 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
TOM1-203ENST00000404284 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
TOM1-203ENST00000404284 MEIS3Q99687 375 aa19.44■□□□□ 0.7
TOM1-203ENST00000404284 OTUD7AQ8TE49 926 aaPredicted RBP19.43■□□□□ 0.7
TOM1-203ENST00000404284 SOX12O15370 315 aa19.43■□□□□ 0.7
TOM1-203ENST00000404284 KDRP35968 1356 aa19.43■□□□□ 0.7
TOM1-203ENST00000404284 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
TOM1-203ENST00000404284 ARXQ96QS3 562 aa19.42■□□□□ 0.7
TOM1-203ENST00000404284 FOXO3O43524 673 aa19.42■□□□□ 0.7
TOM1-203ENST00000404284 MTHFSDQ2M296 383 aaKnown RBP19.41■□□□□ 0.7
TOM1-203ENST00000404284 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
TOM1-203ENST00000404284 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
TOM1-203ENST00000404284 FLT4P35916 1363 aa19.41■□□□□ 0.7
TOM1-203ENST00000404284 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
TOM1-203ENST00000404284 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
TOM1-203ENST00000404284 MIS18AQ9NYP9 233 aa19.4■□□□□ 0.7
TOM1-203ENST00000404284 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
TOM1-203ENST00000404284 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
TOM1-203ENST00000404284 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
TOM1-203ENST00000404284 PIK3C2AO00443 1686 aa19.39■□□□□ 0.69
TOM1-203ENST00000404284 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
TOM1-203ENST00000404284 GBP4Q96PP9 640 aa19.39■□□□□ 0.69
TOM1-203ENST00000404284 PANK2Q9BZ23 570 aa19.39■□□□□ 0.69
TOM1-203ENST00000404284 DIP2AQ14689 1571 aa19.39■□□□□ 0.69
TOM1-203ENST00000404284 LRRC37A3O60309 1634 aa19.39■□□□□ 0.69
TOM1-203ENST00000404284 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 G2E3Q7L622 706 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 SLIT1O75093 1534 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 ARHGAP23Q9P227 1491 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 SDSP20132 328 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 RABEP1Q15276 862 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 TSPYL4Q9UJ04 414 aa19.38■□□□□ 0.69
TOM1-203ENST00000404284 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
TOM1-203ENST00000404284 RTF1Q92541 710 aaKnown RBP19.36■□□□□ 0.69
TOM1-203ENST00000404284 EYA1Q99502 592 aa19.36■□□□□ 0.69
TOM1-203ENST00000404284 FAM208AQ9UK61 1670 aaKnown RBP19.35■□□□□ 0.69
TOM1-203ENST00000404284 F6X3S4 739 aa19.35■□□□□ 0.69
TOM1-203ENST00000404284 APBB1O00213 710 aa19.35■□□□□ 0.69
TOM1-203ENST00000404284 MRE11P49959 708 aa19.35■□□□□ 0.69
TOM1-203ENST00000404284 A0A0U1RQG5 324 aaPredicted RBP19.35■□□□□ 0.69
TOM1-203ENST00000404284 CEBPAP49715 358 aaPredicted RBP19.35■□□□□ 0.69
TOM1-203ENST00000404284 SSFA2P28290 1259 aa19.34■□□□□ 0.69
TOM1-203ENST00000404284 CLCN1P35523 988 aa19.34■□□□□ 0.69
TOM1-203ENST00000404284 CCT4P50991 539 aaKnown RBP19.34■□□□□ 0.69
TOM1-203ENST00000404284 CLEC17AQ6ZS10 378 aa19.34■□□□□ 0.69
TOM1-203ENST00000404284 ISY1Q9ULR0 285 aaKnown RBP19.34■□□□□ 0.69
TOM1-203ENST00000404284 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
TOM1-203ENST00000404284 MARF1Q9Y4F3 1742 aaKnown RBP19.34■□□□□ 0.69
TOM1-203ENST00000404284 HMMRO75330 724 aa19.33■□□□□ 0.69
TOM1-203ENST00000404284 TBX22Q9Y458 520 aa19.33■□□□□ 0.69
TOM1-203ENST00000404284 SLC4A10Q6U841 1118 aa19.33■□□□□ 0.68
TOM1-203ENST00000404284 AMPHP49418 695 aa19.32■□□□□ 0.68
TOM1-203ENST00000404284 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
TOM1-203ENST00000404284 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
TOM1-203ENST00000404284 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
TOM1-203ENST00000404284 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
TOM1-203ENST00000404284 PTMSP20962 102 aa19.32■□□□□ 0.68
TOM1-203ENST00000404284 SKOR2Q2VWA4 1001 aaPredicted RBP19.31■□□□□ 0.68
TOM1-203ENST00000404284 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
TOM1-203ENST00000404284 CASC1Q6TDU7 716 aa19.31■□□□□ 0.68
TOM1-203ENST00000404284 TUBGCP6Q96RT7 1819 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms