RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 SPINK5Q9NQ38 1064 aaPredicted RBP30.06■■■□□ 2.4
TRIOBP-203ENST00000403663 DLG5Q8TDM6 1919 aa30.05■■■□□ 2.4
TRIOBP-203ENST00000403663 NBPF6Q5VWK0 638 aa30.05■■■□□ 2.4
TRIOBP-203ENST00000403663 NBPF4Q96M43 638 aa30.05■■■□□ 2.4
TRIOBP-203ENST00000403663 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
TRIOBP-203ENST00000403663 KDRP35968 1356 aa30.04■■■□□ 2.4
TRIOBP-203ENST00000403663 ANKRD24Q8TF21 1146 aa30.04■■■□□ 2.4
TRIOBP-203ENST00000403663 PNNQ9H307 717 aaKnown RBP30.04■■■□□ 2.4
TRIOBP-203ENST00000403663 CPDO75976 1380 aa30.04■■■□□ 2.4
TRIOBP-203ENST00000403663 HAP1P54257 671 aaPredicted RBP30.03■■■□□ 2.4
TRIOBP-203ENST00000403663 TRIM35Q9UPQ4 493 aa30.02■■■□□ 2.4
TRIOBP-203ENST00000403663 EIF5BO60841 1220 aaKnown RBP30.01■■■□□ 2.4
TRIOBP-203ENST00000403663 RIPK4P57078 832 aa30.01■■■□□ 2.39
TRIOBP-203ENST00000403663 FAM43AQ8N2R8 423 aa30■■■□□ 2.39
TRIOBP-203ENST00000403663 ERBB3P21860 1342 aa30■■■□□ 2.39
TRIOBP-203ENST00000403663 COL22A1Q8NFW1 1626 aaPredicted RBP30■■■□□ 2.39
TRIOBP-203ENST00000403663 GOLGA2Q08379 1002 aa29.99■■■□□ 2.39
TRIOBP-203ENST00000403663 DUSP27Q5VZP5 1158 aa29.99■■■□□ 2.39
TRIOBP-203ENST00000403663 PRDM11Q9NQV5 511 aa29.99■■■□□ 2.39
TRIOBP-203ENST00000403663 NGEFQ8N5V2 710 aa29.98■■■□□ 2.39
TRIOBP-203ENST00000403663 NFE2L2Q16236 605 aa29.97■■■□□ 2.39
TRIOBP-203ENST00000403663 CCDC27Q2M243 656 aa29.97■■■□□ 2.39
TRIOBP-203ENST00000403663 LMO7Q8WWI1 1683 aa29.97■■■□□ 2.39
TRIOBP-203ENST00000403663 CAMTA1Q9Y6Y1 1673 aa29.96■■■□□ 2.39
TRIOBP-203ENST00000403663 SLFN5Q08AF3 891 aa29.95■■■□□ 2.38
TRIOBP-203ENST00000403663 ABCC6O95255 1503 aa29.94■■■□□ 2.38
TRIOBP-203ENST00000403663 RGS3P49796 1198 aa29.93■■■□□ 2.38
TRIOBP-203ENST00000403663 FAM83GA6ND36 823 aa29.93■■■□□ 2.38
TRIOBP-203ENST00000403663 THUMPD2Q9BTF0 503 aaKnown RBP29.92■■■□□ 2.38
TRIOBP-203ENST00000403663 MTHFSDQ2M296 383 aaKnown RBP29.91■■■□□ 2.38
TRIOBP-203ENST00000403663 NCAPD2Q15021 1401 aa29.91■■■□□ 2.38
TRIOBP-203ENST00000403663 NCBP3Q53F19 620 aaKnown RBP29.91■■■□□ 2.38
TRIOBP-203ENST00000403663 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.91■■■□□ 2.38
TRIOBP-203ENST00000403663 TRMT2AQ8IZ69 625 aaKnown RBP29.9■■■□□ 2.38
TRIOBP-203ENST00000403663 FAM208AQ9UK61 1670 aaKnown RBP29.89■■■□□ 2.38
TRIOBP-203ENST00000403663 NLRP2Q9NX02 1062 aa29.89■■■□□ 2.37
TRIOBP-203ENST00000403663 DCTN1Q14203 1278 aa29.88■■■□□ 2.37
TRIOBP-203ENST00000403663 WDR63Q8IWG1 891 aa29.88■■■□□ 2.37
TRIOBP-203ENST00000403663 CSB-PGBD3P0DP91 1061 aa29.88■■■□□ 2.37
TRIOBP-203ENST00000403663 COL5A2P05997 1499 aaPredicted RBP29.87■■■□□ 2.37
TRIOBP-203ENST00000403663 E9PSI1 815 aa29.86■■■□□ 2.37
TRIOBP-203ENST00000403663 NUTM2BA6NNL0 878 aaPredicted RBP29.82■■■□□ 2.36
TRIOBP-203ENST00000403663 NUTM2EB1AL46 878 aaPredicted RBP29.82■■■□□ 2.36
TRIOBP-203ENST00000403663 ADAMTS2O95450 1211 aa29.82■■■□□ 2.36
TRIOBP-203ENST00000403663 NUTM2AQ8IVF1 878 aaPredicted RBP29.82■■■□□ 2.36
TRIOBP-203ENST00000403663 MCM10Q7L590 875 aa29.81■■■□□ 2.36
TRIOBP-203ENST00000403663 TSR2Q969E8 191 aaKnown RBP29.81■■■□□ 2.36
TRIOBP-203ENST00000403663 STRN4Q9NRL3 753 aa29.81■■■□□ 2.36
TRIOBP-203ENST00000403663 WDR17Q8IZU2 1322 aa29.8■■■□□ 2.36
TRIOBP-203ENST00000403663 COL14A1Q05707 1796 aaKnown RBP29.8■■■□□ 2.36
TRIOBP-203ENST00000403663 BTG4Q9NY30 223 aa29.79■■■□□ 2.36
TRIOBP-203ENST00000403663 LARP1Q6PKG0 1096 aaKnown RBP29.78■■■□□ 2.36
TRIOBP-203ENST00000403663 MEGF6O75095 1541 aa29.78■■■□□ 2.36
TRIOBP-203ENST00000403663 GAS2L2Q8NHY3 880 aa29.78■■■□□ 2.36
TRIOBP-203ENST00000403663 TOM1L2Q6ZVM7 507 aa29.76■■■□□ 2.35
TRIOBP-203ENST00000403663 PLCH1Q4KWH8 1693 aa29.76■■■□□ 2.35
TRIOBP-203ENST00000403663 HSPA1LP34931 641 aa29.76■■■□□ 2.35
TRIOBP-203ENST00000403663 LMOD3Q0VAK6 560 aa29.75■■■□□ 2.35
TRIOBP-203ENST00000403663 IL16Q14005 1332 aa29.74■■■□□ 2.35
TRIOBP-203ENST00000403663 EVA1CP58658 441 aa29.73■■■□□ 2.35
TRIOBP-203ENST00000403663 JCADQ9P266 1359 aa29.73■■■□□ 2.35
TRIOBP-203ENST00000403663 MYH16Q9H6N6 1097 aa29.72■■■□□ 2.35
TRIOBP-203ENST00000403663 MAP3K5Q99683 1374 aa29.71■■■□□ 2.35
TRIOBP-203ENST00000403663 IGHDP01880 384 aa29.71■■■□□ 2.35
TRIOBP-203ENST00000403663 RAPGEF4Q8WZA2 1011 aa29.71■■■□□ 2.35
TRIOBP-203ENST00000403663 VIRMAQ69YN4 1812 aaKnown RBP29.71■■■□□ 2.35
TRIOBP-203ENST00000403663 GNAT3A8MTJ3 354 aa29.71■■■□□ 2.35
TRIOBP-203ENST00000403663 ZNF530Q6P9A1 599 aaPredicted RBP29.7■■■□□ 2.35
TRIOBP-203ENST00000403663 SEC24BO95487 1268 aa29.7■■■□□ 2.34
TRIOBP-203ENST00000403663 PLEKHO1Q53GL0 409 aaPredicted RBP29.7■■■□□ 2.34
TRIOBP-203ENST00000403663 CRB1P82279 1406 aa29.69■■■□□ 2.34
TRIOBP-203ENST00000403663 ZNF853P0CG23 659 aa29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 IL17REQ8NFR9 667 aa29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 RRAGDQ9NQL2 400 aaPredicted RBP29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 BCAR3O75815 825 aa29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 BECN1Q14457 450 aa29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 RTF1Q92541 710 aaKnown RBP29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 LRRC37A3O60309 1634 aa29.68■■■□□ 2.34
TRIOBP-203ENST00000403663 CARD10Q9BWT7 1032 aa29.67■■■□□ 2.34
TRIOBP-203ENST00000403663 NRAPQ86VF7 1730 aa29.67■■■□□ 2.34
TRIOBP-203ENST00000403663 TATP17735 454 aaPredicted RBP29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 EXOSC9Q06265 439 aaKnown RBP29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 AMOTQ4VCS5 1084 aa29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 MBIPQ9NS73 344 aa29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 IFT57Q9NWB7 429 aa29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 L1TD1Q5T7N2 865 aaKnown RBP29.66■■■□□ 2.34
TRIOBP-203ENST00000403663 LGR6Q9HBX8 967 aa29.65■■■□□ 2.34
TRIOBP-203ENST00000403663 LRP6O75581 1613 aa29.65■■■□□ 2.34
TRIOBP-203ENST00000403663 PKD1L3Q7Z443 1732 aa29.65■■■□□ 2.34
TRIOBP-203ENST00000403663 CALD1Q05682 793 aaKnown RBP29.65■■■□□ 2.34
TRIOBP-203ENST00000403663 CFAP44Q96MT7 982 aa29.65■■■□□ 2.34
TRIOBP-203ENST00000403663 SLKQ9H2G2 1235 aaPredicted RBP29.64■■■□□ 2.34
TRIOBP-203ENST00000403663 MIS18AQ9NYP9 233 aa29.64■■■□□ 2.34
TRIOBP-203ENST00000403663 GNAI1P63096 354 aa29.63■■■□□ 2.33
TRIOBP-203ENST00000403663 PARP4Q9UKK3 1724 aaKnown RBP29.63■■■□□ 2.33
TRIOBP-203ENST00000403663 MPRIPQ6WCQ1 1025 aa29.63■■■□□ 2.33
TRIOBP-203ENST00000403663 ANTXR1Q9H6X2 564 aa29.63■■■□□ 2.33
TRIOBP-203ENST00000403663 HTATSF1O43719 755 aaKnown RBP29.62■■■□□ 2.33
TRIOBP-203ENST00000403663 AKAP4Q5JQC9 854 aa29.62■■■□□ 2.33
TRIOBP-203ENST00000403663 OVOS2A0A0G2JMS6 1433 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms