RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NASPP49321 788 aaPredicted RBP14.77□□□□□ -0.04
RBM39-206ENST00000403542 CFAP74Q9C0B2 1584 aa14.77□□□□□ -0.05
RBM39-206ENST00000403542 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.05
RBM39-206ENST00000403542 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
RBM39-206ENST00000403542 INTS3Q68E01 1043 aaKnown RBP14.76□□□□□ -0.05
RBM39-206ENST00000403542 ANKRD44Q8N8A2 993 aa14.76□□□□□ -0.05
RBM39-206ENST00000403542 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.76□□□□□ -0.05
RBM39-206ENST00000403542 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
RBM39-206ENST00000403542 DTNBO60941 627 aa14.75□□□□□ -0.05
RBM39-206ENST00000403542 CPS1P31327 1500 aa14.75□□□□□ -0.05
RBM39-206ENST00000403542 PIK3R4Q99570 1358 aa14.75□□□□□ -0.05
RBM39-206ENST00000403542 RABEP1Q15276 862 aa14.75□□□□□ -0.05
RBM39-206ENST00000403542 SKOR2Q2VWA4 1001 aaPredicted RBP14.75□□□□□ -0.05
RBM39-206ENST00000403542 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
RBM39-206ENST00000403542 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
RBM39-206ENST00000403542 TSPYL4Q9UJ04 414 aa14.74□□□□□ -0.05
RBM39-206ENST00000403542 NEK4P51957 841 aa14.73□□□□□ -0.05
RBM39-206ENST00000403542 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
RBM39-206ENST00000403542 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
RBM39-206ENST00000403542 PREX1Q8TCU6 1659 aa14.73□□□□□ -0.05
RBM39-206ENST00000403542 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 RTL1A6NKG5 1358 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 NEO1Q92859 1461 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 LTV1Q96GA3 475 aaPredicted RBP14.72□□□□□ -0.05
RBM39-206ENST00000403542 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 NSFL1CQ9UNZ2 370 aaKnown RBP14.72□□□□□ -0.05
RBM39-206ENST00000403542 KIF20BQ96Q89 1820 aa14.72□□□□□ -0.05
RBM39-206ENST00000403542 CHL1O00533 1208 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 MAP4K4O95819 1239 aaPredicted RBP14.71□□□□□ -0.05
RBM39-206ENST00000403542 RNF214Q8ND24 703 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 ACEP12821 1306 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 ST18O60284 1047 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 ZSCAN23Q3MJ62 389 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 MPNDQ8N594 471 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 ANP32BQ92688 251 aaKnown RBP14.71□□□□□ -0.05
RBM39-206ENST00000403542 ATP10DQ9P241 1426 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 KNDC1Q76NI1 1749 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 ANKRD26Q9UPS8 1709 aa14.71□□□□□ -0.05
RBM39-206ENST00000403542 RPAP2Q8IXW5 612 aaPredicted RBP14.71□□□□□ -0.06
RBM39-206ENST00000403542 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.06
RBM39-206ENST00000403542 UPF3BQ9BZI7 483 aaKnown RBP14.71□□□□□ -0.06
RBM39-206ENST00000403542 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
RBM39-206ENST00000403542 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
RBM39-206ENST00000403542 MTHFSDQ2M296 383 aaKnown RBP14.7□□□□□ -0.06
RBM39-206ENST00000403542 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
RBM39-206ENST00000403542 LMBRD1Q9NUN5 540 aa14.7□□□□□ -0.06
RBM39-206ENST00000403542 FKBP5Q13451 457 aaPredicted RBP14.7□□□□□ -0.06
RBM39-206ENST00000403542 ANO2Q9NQ90 1003 aa14.7□□□□□ -0.06
RBM39-206ENST00000403542 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
RBM39-206ENST00000403542 ZDHHC9Q9Y397 364 aa14.7□□□□□ -0.06
RBM39-206ENST00000403542 ATP7BP35670 1465 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 GDPD2Q9HCC8 539 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 IL1RAPL2Q9NP60 686 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 A2ML1A8K2U0 1454 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 TTC21BQ7Z4L5 1316 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 PDE1AP54750 535 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 GPT2Q8TD30 523 aa14.69□□□□□ -0.06
RBM39-206ENST00000403542 PNMA6EA0A0J9YXQ4 647 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 SYCE3A1L190 88 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 ERC2O15083 957 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 NUCB2P80303 420 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 RGS12O14924 1447 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 MAP3K19Q56UN5 1328 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 UBE2Q2Q8WVN8 375 aa14.68□□□□□ -0.06
RBM39-206ENST00000403542 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
RBM39-206ENST00000403542 DLG5Q8TDM6 1919 aa14.67□□□□□ -0.06
RBM39-206ENST00000403542 REC8O95072 547 aa14.67□□□□□ -0.06
RBM39-206ENST00000403542 HSP90AA2PQ14568 343 aaPredicted RBP14.67□□□□□ -0.06
RBM39-206ENST00000403542 CDC42BPGQ6DT37 1551 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 UNC5CLQ8IV45 518 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 TMX3Q96JJ7 454 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 ARID3AQ99856 593 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 CLTCQ00610 1675 aaKnown RBP14.66□□□□□ -0.06
RBM39-206ENST00000403542 HMMRO75330 724 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 AMPHP49418 695 aa14.66□□□□□ -0.06
RBM39-206ENST00000403542 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
RBM39-206ENST00000403542 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 C14orf37Q86TY3 774 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 NUTM1Q86Y26 1132 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 TMEM63CQ9P1W3 806 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 ROBO2Q9HCK4 1378 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 RICTORQ6R327 1708 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 MSNP26038 577 aaKnown RBP14.65□□□□□ -0.06
RBM39-206ENST00000403542 USHBP1Q8N6Y0 703 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 STK31Q9BXU1 1019 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 AATKQ6ZMQ8 1374 aa14.65□□□□□ -0.06
RBM39-206ENST00000403542 KIAA1211Q6ZU35 1233 aa14.64□□□□□ -0.07
RBM39-206ENST00000403542 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
RBM39-206ENST00000403542 GNAI2P04899 355 aa14.64□□□□□ -0.07
RBM39-206ENST00000403542 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
RBM39-206ENST00000403542 IL25Q9H293 177 aa14.64□□□□□ -0.07
RBM39-206ENST00000403542 PTMSP20962 102 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 XPCQ01831 940 aaPredicted RBP14.63□□□□□ -0.07
RBM39-206ENST00000403542 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
RBM39-206ENST00000403542 PTPRCP08575 1304 aa14.63□□□□□ -0.07
RBM39-206ENST00000403542 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
RBM39-206ENST00000403542 RBM10P98175 930 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms