RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PRMT3O60678 531 aa6.93□□□□□ -1.3
HMGB1P17-201ENST00000403495 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
HMGB1P17-201ENST00000403495 SLC19A1P41440 591 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 GRM5P41594 1212 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 KCNA1Q09470 495 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 PRIMPOLQ96LW4 560 aa6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 CDV3Q9UKY7 258 aaKnown RBP6.92□□□□□ -1.3
HMGB1P17-201ENST00000403495 SIAH2O43255 324 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 ATP2B4P23634 1241 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 USP4Q13107 963 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 SIX5Q8N196 739 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 MAP4K5Q9Y4K4 846 aa6.91□□□□□ -1.3
HMGB1P17-201ENST00000403495 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 NR3C2P08235 984 aa6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 SSFA2P28290 1259 aa6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 SEC13P55735 322 aa6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 FOXC1Q12948 553 aa6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 TMCO4Q5TGY1 634 aa6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 ZNF784Q8NCA9 323 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 TSEN2Q8NCE0 465 aaKnown RBP6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.3
HMGB1P17-201ENST00000403495 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
HMGB1P17-201ENST00000403495 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
HMGB1P17-201ENST00000403495 HINFPQ9BQA5 517 aa6.89□□□□□ -1.31
HMGB1P17-201ENST00000403495 OSBPL3Q9H4L5 887 aa6.89□□□□□ -1.31
HMGB1P17-201ENST00000403495 ADH1CP00326 375 aa6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 SERPINB4P48594 390 aa6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 ERVK-9P63128 1117 aa6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 CC2D2BQ6DHV5 1058 aa6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 RBM19Q9Y4C8 960 aaKnown RBP6.88□□□□□ -1.31
HMGB1P17-201ENST00000403495 WNT7AO00755 349 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 ALDH1A1P00352 501 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 ADD1P35611 737 aaKnown RBP6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 ZNF697Q5TEC3 545 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 SPRYD7Q5W111 196 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 CAPN12Q6ZSI9 719 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 CCDC116Q8IYX3 515 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 SIRT1Q96EB6 747 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 MKNK1Q9BUB5 465 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 ZNF358Q9NW07 568 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 SERTAD1Q9UHV2 236 aa6.87□□□□□ -1.31
HMGB1P17-201ENST00000403495 TMEM229AB2RXF0 380 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 LILRA1O75019 489 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 SCNN1DP51172 638 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 OCLNQ16625 522 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 TXNDC2Q86VQ3 553 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 ESF1Q9H501 851 aaKnown RBP6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 PLA2G2EQ9NZK7 142 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
HMGB1P17-201ENST00000403495 GDF10P55107 478 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 TBCELQ5QJ74 424 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 FOXD4L5Q5VV16 416 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 TNS4Q8IZW8 715 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 FOXD4L4Q8WXT5 416 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 PRKD2Q9BZL6 878 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 PKD2L1Q9P0L9 805 aa6.85□□□□□ -1.31
HMGB1P17-201ENST00000403495 PATL2C9JE40 543 aaKnown RBP6.84□□□□□ -1.31
HMGB1P17-201ENST00000403495 TNFRSF10AO00220 468 aa6.84□□□□□ -1.31
HMGB1P17-201ENST00000403495 CBLBQ13191 982 aa6.84□□□□□ -1.31
HMGB1P17-201ENST00000403495 CXXC1Q9P0U4 656 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P17-201ENST00000403495 GNEQ9Y223 722 aaKnown RBP6.84□□□□□ -1.31
HMGB1P17-201ENST00000403495 A0A0G2JS52 829 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 J3QL48 77 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 MYT1Q01538 1121 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 DHX9Q08211 1270 aaKnown RBP6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 NR5A1Q13285 461 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 NNTQ13423 1086 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 SND1Q7KZF4 910 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 SEPT3Q9UH03 358 aa6.83□□□□□ -1.32
HMGB1P17-201ENST00000403495 ABL1P00519 1130 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 ZNF211Q13398 564 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 MPNDQ8N594 471 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 CCER1Q8TC90 406 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 AGBL1Q96MI9 1066 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 ARHGEF10LQ9HCE6 1279 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 WASF2Q9Y6W5 498 aa6.82□□□□□ -1.32
HMGB1P17-201ENST00000403495 INHAP05111 366 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 WEE1P30291 646 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 MTMR3Q13615 1198 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 IFFO2Q5TF58 517 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 NPM2Q86SE8 214 aaKnown RBP6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 CCDC125Q86Z20 511 aa6.81□□□□□ -1.32
HMGB1P17-201ENST00000403495 CHMP7Q8WUX9 453 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms