RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
NDEL1-203ENST00000402554 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
NDEL1-203ENST00000402554 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
NDEL1-203ENST00000402554 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
NDEL1-203ENST00000402554 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
NDEL1-203ENST00000402554 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
NDEL1-203ENST00000402554 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
NDEL1-203ENST00000402554 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
NDEL1-203ENST00000402554 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
NDEL1-203ENST00000402554 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
NDEL1-203ENST00000402554 THRAP3Q9Y2W1 955 aaKnown RBP17.16■□□□□ 0.34
NDEL1-203ENST00000402554 FLT4P35916 1363 aa17.16■□□□□ 0.34
NDEL1-203ENST00000402554 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
NDEL1-203ENST00000402554 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
NDEL1-203ENST00000402554 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
NDEL1-203ENST00000402554 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
NDEL1-203ENST00000402554 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
NDEL1-203ENST00000402554 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
NDEL1-203ENST00000402554 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
NDEL1-203ENST00000402554 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
NDEL1-203ENST00000402554 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
NDEL1-203ENST00000402554 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
NDEL1-203ENST00000402554 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
NDEL1-203ENST00000402554 E9PSI1 815 aa17.11■□□□□ 0.33
NDEL1-203ENST00000402554 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
NDEL1-203ENST00000402554 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
NDEL1-203ENST00000402554 DDB1Q16531 1140 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 NBPF6Q5VWK0 638 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 NBPF4Q96M43 638 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
NDEL1-203ENST00000402554 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
NDEL1-203ENST00000402554 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
NDEL1-203ENST00000402554 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
NDEL1-203ENST00000402554 MEGF6O75095 1541 aa17.09■□□□□ 0.33
NDEL1-203ENST00000402554 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
NDEL1-203ENST00000402554 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
NDEL1-203ENST00000402554 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.33
NDEL1-203ENST00000402554 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.33
NDEL1-203ENST00000402554 IL2RBP14784 551 aa17.07■□□□□ 0.32
NDEL1-203ENST00000402554 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
NDEL1-203ENST00000402554 FCHSD2O94868 740 aa17.07■□□□□ 0.32
NDEL1-203ENST00000402554 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
NDEL1-203ENST00000402554 IL13P35225 146 aa17.06■□□□□ 0.32
NDEL1-203ENST00000402554 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
NDEL1-203ENST00000402554 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
NDEL1-203ENST00000402554 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
NDEL1-203ENST00000402554 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
NDEL1-203ENST00000402554 TRIM37O94972 964 aa17.04■□□□□ 0.32
NDEL1-203ENST00000402554 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
NDEL1-203ENST00000402554 EXOC5O00471 708 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 NEFMP07197 916 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 EYA1Q99502 592 aa17.03■□□□□ 0.32
NDEL1-203ENST00000402554 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
NDEL1-203ENST00000402554 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
NDEL1-203ENST00000402554 PKD1L3Q7Z443 1732 aa17■□□□□ 0.31
NDEL1-203ENST00000402554 HMOX1P09601 288 aa17■□□□□ 0.31
NDEL1-203ENST00000402554 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
NDEL1-203ENST00000402554 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
NDEL1-203ENST00000402554 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
NDEL1-203ENST00000402554 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 RAPGEF4Q8WZA2 1011 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 RIPK4P57078 832 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
NDEL1-203ENST00000402554 PLIN1O60240 522 aa16.98■□□□□ 0.31
NDEL1-203ENST00000402554 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
NDEL1-203ENST00000402554 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
NDEL1-203ENST00000402554 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
NDEL1-203ENST00000402554 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
NDEL1-203ENST00000402554 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
NDEL1-203ENST00000402554 EN1Q05925 392 aaPredicted RBP16.97■□□□□ 0.31
NDEL1-203ENST00000402554 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
NDEL1-203ENST00000402554 IL16Q14005 1332 aa16.96■□□□□ 0.31
NDEL1-203ENST00000402554 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
NDEL1-203ENST00000402554 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.3
NDEL1-203ENST00000402554 BAG6P46379 1132 aa16.95■□□□□ 0.3
NDEL1-203ENST00000402554 EXOC6Q8TAG9 804 aa16.95■□□□□ 0.3
NDEL1-203ENST00000402554 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
NDEL1-203ENST00000402554 KCNQ2O43526 872 aa16.95■□□□□ 0.3
NDEL1-203ENST00000402554 APBA3O96018 575 aa16.95■□□□□ 0.3
NDEL1-203ENST00000402554 BCL9O00512 1426 aa16.94■□□□□ 0.3
NDEL1-203ENST00000402554 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
NDEL1-203ENST00000402554 BTAF1O14981 1849 aa16.94■□□□□ 0.3
NDEL1-203ENST00000402554 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
NDEL1-203ENST00000402554 RREB1Q92766 1687 aa16.94■□□□□ 0.3
NDEL1-203ENST00000402554 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
NDEL1-203ENST00000402554 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
NDEL1-203ENST00000402554 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
NDEL1-203ENST00000402554 PCDH11XQ9BZA7 1347 aa16.91■□□□□ 0.3
NDEL1-203ENST00000402554 PCDH11YQ9BZA8 1340 aa16.91■□□□□ 0.3
NDEL1-203ENST00000402554 BCAR3O75815 825 aa16.91■□□□□ 0.3
NDEL1-203ENST00000402554 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms