RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
SNU13-204ENST00000402458 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
SNU13-204ENST00000402458 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
SNU13-204ENST00000402458 RGS12O14924 1447 aa18.13■□□□□ 0.49
SNU13-204ENST00000402458 MEGF6O75095 1541 aa18.13■□□□□ 0.49
SNU13-204ENST00000402458 FCHSD2O94868 740 aa18.12■□□□□ 0.49
SNU13-204ENST00000402458 MIER1Q8N108 512 aa18.12■□□□□ 0.49
SNU13-204ENST00000402458 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
SNU13-204ENST00000402458 OVOS2A0A0G2JMS6 1433 aa18.12■□□□□ 0.49
SNU13-204ENST00000402458 AMOTQ4VCS5 1084 aa18.11■□□□□ 0.49
SNU13-204ENST00000402458 PLEKHO1Q53GL0 409 aaPredicted RBP18.11■□□□□ 0.49
SNU13-204ENST00000402458 TNS2Q63HR2 1409 aa18.11■□□□□ 0.49
SNU13-204ENST00000402458 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
SNU13-204ENST00000402458 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
SNU13-204ENST00000402458 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
SNU13-204ENST00000402458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.49
SNU13-204ENST00000402458 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
SNU13-204ENST00000402458 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
SNU13-204ENST00000402458 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
SNU13-204ENST00000402458 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
SNU13-204ENST00000402458 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
SNU13-204ENST00000402458 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
SNU13-204ENST00000402458 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.48
SNU13-204ENST00000402458 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
SNU13-204ENST00000402458 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
SNU13-204ENST00000402458 PNISRQ8TF01 805 aaKnown RBP18.06■□□□□ 0.48
SNU13-204ENST00000402458 C1orf141Q5JVX7 400 aa18.05■□□□□ 0.48
SNU13-204ENST00000402458 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
SNU13-204ENST00000402458 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
SNU13-204ENST00000402458 IFNL2Q8IZJ0 200 aa18.04■□□□□ 0.48
SNU13-204ENST00000402458 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
SNU13-204ENST00000402458 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
SNU13-204ENST00000402458 MARCH10Q8NA82 808 aaPredicted RBP18.03■□□□□ 0.48
SNU13-204ENST00000402458 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
SNU13-204ENST00000402458 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
SNU13-204ENST00000402458 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
SNU13-204ENST00000402458 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
SNU13-204ENST00000402458 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.48
SNU13-204ENST00000402458 CYP27B1O15528 508 aa18.01■□□□□ 0.47
SNU13-204ENST00000402458 PHKG2P15735 406 aa18.01■□□□□ 0.47
SNU13-204ENST00000402458 AKAP4Q5JQC9 854 aa18.01■□□□□ 0.47
SNU13-204ENST00000402458 CCDC146Q8IYE0 955 aa18.01■□□□□ 0.47
SNU13-204ENST00000402458 PHACTR3Q96KR7 559 aa18.01■□□□□ 0.47
SNU13-204ENST00000402458 FAM182BQ5T319 152 aa18■□□□□ 0.47
SNU13-204ENST00000402458 KAT6BQ8WYB5 2073 aa17.99■□□□□ 0.47
SNU13-204ENST00000402458 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
SNU13-204ENST00000402458 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
SNU13-204ENST00000402458 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
SNU13-204ENST00000402458 NKX1-1Q15270 411 aaPredicted RBP17.97■□□□□ 0.47
SNU13-204ENST00000402458 ILDR2Q71H61 639 aa17.97■□□□□ 0.47
SNU13-204ENST00000402458 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
SNU13-204ENST00000402458 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
SNU13-204ENST00000402458 BCL9O00512 1426 aa17.97■□□□□ 0.47
SNU13-204ENST00000402458 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
SNU13-204ENST00000402458 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
SNU13-204ENST00000402458 MPRIPQ6WCQ1 1025 aa17.94■□□□□ 0.46
SNU13-204ENST00000402458 ACSBG1Q96GR2 724 aa17.94■□□□□ 0.46
SNU13-204ENST00000402458 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
SNU13-204ENST00000402458 EP400Q96L91 3159 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 APAF1O14727 1248 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
SNU13-204ENST00000402458 RIPK4P57078 832 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
SNU13-204ENST00000402458 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
SNU13-204ENST00000402458 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
SNU13-204ENST00000402458 SCN11AQ9UI33 1791 aa17.92■□□□□ 0.46
SNU13-204ENST00000402458 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
SNU13-204ENST00000402458 SF3B2Q13435 895 aaKnown RBP17.92■□□□□ 0.46
SNU13-204ENST00000402458 RNMTO43148 476 aaKnown RBP17.91■□□□□ 0.46
SNU13-204ENST00000402458 TRIM37O94972 964 aa17.91■□□□□ 0.46
SNU13-204ENST00000402458 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
SNU13-204ENST00000402458 CABP4P57796 275 aa17.91■□□□□ 0.46
SNU13-204ENST00000402458 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
SNU13-204ENST00000402458 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
SNU13-204ENST00000402458 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
SNU13-204ENST00000402458 TEFQ10587 303 aa17.9■□□□□ 0.46
SNU13-204ENST00000402458 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
SNU13-204ENST00000402458 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
SNU13-204ENST00000402458 ITGB4P16144 1822 aa17.9■□□□□ 0.46
SNU13-204ENST00000402458 CCDC125Q86Z20 511 aa17.89■□□□□ 0.45
SNU13-204ENST00000402458 LGR6Q9HBX8 967 aa17.89■□□□□ 0.45
SNU13-204ENST00000402458 TOGARAM1Q9Y4F4 1720 aa17.89■□□□□ 0.45
SNU13-204ENST00000402458 MCM10Q7L590 875 aa17.88■□□□□ 0.45
SNU13-204ENST00000402458 ADAMTS7Q9UKP4 1686 aa17.87■□□□□ 0.45
SNU13-204ENST00000402458 KCNQ2O43526 872 aa17.87■□□□□ 0.45
SNU13-204ENST00000402458 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
SNU13-204ENST00000402458 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
SNU13-204ENST00000402458 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
SNU13-204ENST00000402458 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
SNU13-204ENST00000402458 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
SNU13-204ENST00000402458 BTAF1O14981 1849 aa17.85■□□□□ 0.45
SNU13-204ENST00000402458 APBA3O96018 575 aa17.85■□□□□ 0.45
SNU13-204ENST00000402458 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
SNU13-204ENST00000402458 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
SNU13-204ENST00000402458 CEMIPQ8WUJ3 1361 aa17.85■□□□□ 0.45
SNU13-204ENST00000402458 MRC1P22897 1456 aa17.84■□□□□ 0.45
SNU13-204ENST00000402458 PIGBQ92521 554 aa17.84■□□□□ 0.45
SNU13-204ENST00000402458 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms