RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 CDKL5O76039 1030 aa19.75■□□□□ 0.75
TSC2-204ENST00000401874 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
TSC2-204ENST00000401874 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
TSC2-204ENST00000401874 NSD2O96028 1365 aa19.75■□□□□ 0.75
TSC2-204ENST00000401874 NACAP1Q9BZK3 213 aa19.75■□□□□ 0.75
TSC2-204ENST00000401874 RRP12Q5JTH9 1297 aaKnown RBP19.75■□□□□ 0.75
TSC2-204ENST00000401874 GNAT3A8MTJ3 354 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 MAP3K11Q16584 847 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 THEMISQ8N1K5 641 aaPredicted RBP19.74■□□□□ 0.75
TSC2-204ENST00000401874 PPFIBP1Q86W92 1011 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 CCDC61Q9Y6R9 512 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 CABP4P57796 275 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 EXOC6BQ9Y2D4 811 aa19.74■□□□□ 0.75
TSC2-204ENST00000401874 CASTP20810 708 aaKnown RBP19.73■□□□□ 0.75
TSC2-204ENST00000401874 NUDT16Q96DE0 195 aaKnown RBP19.73■□□□□ 0.75
TSC2-204ENST00000401874 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
TSC2-204ENST00000401874 BTBD11A6QL63 1104 aa19.73■□□□□ 0.75
TSC2-204ENST00000401874 MYO6Q9UM54 1294 aa19.73■□□□□ 0.75
TSC2-204ENST00000401874 GLRX3O76003 335 aaKnown RBP19.73■□□□□ 0.75
TSC2-204ENST00000401874 ZNHIT6Q9NWK9 470 aaKnown RBP19.73■□□□□ 0.75
TSC2-204ENST00000401874 CCDC69A6NI79 296 aa19.72■□□□□ 0.75
TSC2-204ENST00000401874 CT47A1Q5JQC4 288 aaPredicted RBP19.72■□□□□ 0.75
TSC2-204ENST00000401874 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
TSC2-204ENST00000401874 MPNDQ8N594 471 aa19.72■□□□□ 0.75
TSC2-204ENST00000401874 CDK5RAP3Q96JB5 506 aa19.72■□□□□ 0.75
TSC2-204ENST00000401874 NUTM1Q86Y26 1132 aa19.72■□□□□ 0.75
TSC2-204ENST00000401874 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 LEKR1Q6ZMV7 388 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 PATL2C9JE40 543 aaKnown RBP19.71■□□□□ 0.75
TSC2-204ENST00000401874 CCDC183Q5T5S1 534 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 SMTNL1A8MU46 457 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 TNPO1Q92973 898 aaKnown RBP19.71■□□□□ 0.75
TSC2-204ENST00000401874 THUMPD2Q9BTF0 503 aaKnown RBP19.71■□□□□ 0.75
TSC2-204ENST00000401874 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 TRIM27P14373 513 aa19.71■□□□□ 0.75
TSC2-204ENST00000401874 UPF3BQ9BZI7 483 aaKnown RBP19.71■□□□□ 0.75
TSC2-204ENST00000401874 PRM3Q9NNZ6 103 aa19.7■□□□□ 0.74
TSC2-204ENST00000401874 SH2B1Q9NRF2 756 aaPredicted RBP19.7■□□□□ 0.74
TSC2-204ENST00000401874 DCTN1Q14203 1278 aa19.7■□□□□ 0.74
TSC2-204ENST00000401874 CCDC57Q2TAC2 916 aa19.7■□□□□ 0.74
TSC2-204ENST00000401874 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
TSC2-204ENST00000401874 STIM1Q13586 685 aa19.69■□□□□ 0.74
TSC2-204ENST00000401874 BMP2KLQ5H9B9 411 aa19.69■□□□□ 0.74
TSC2-204ENST00000401874 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
TSC2-204ENST00000401874 MYL6BP14649 208 aa19.69■□□□□ 0.74
TSC2-204ENST00000401874 NOL7Q9UMY1 257 aaKnown RBP19.69■□□□□ 0.74
TSC2-204ENST00000401874 ERLIN1O75477 346 aa19.69■□□□□ 0.74
TSC2-204ENST00000401874 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
TSC2-204ENST00000401874 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 TBC1D32Q96NH3 1257 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 SSFA2P28290 1259 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 PROSER2Q86WR7 435 aaPredicted RBP19.68■□□□□ 0.74
TSC2-204ENST00000401874 MCM10Q7L590 875 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 TXLNBQ8N3L3 684 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
TSC2-204ENST00000401874 CEP126Q9P2H0 1117 aa19.67■□□□□ 0.74
TSC2-204ENST00000401874 IL16Q14005 1332 aa19.67■□□□□ 0.74
TSC2-204ENST00000401874 SCAND2PQ9GZW5 306 aaPredicted RBP19.67■□□□□ 0.74
TSC2-204ENST00000401874 PTPRCP08575 1304 aa19.67■□□□□ 0.74
TSC2-204ENST00000401874 KIF2AO00139 706 aaPredicted RBP19.67■□□□□ 0.74
TSC2-204ENST00000401874 CCAR1Q8IX12 1150 aaKnown RBP19.67■□□□□ 0.74
TSC2-204ENST00000401874 CCDC83Q8IWF9 413 aa19.67■□□□□ 0.74
TSC2-204ENST00000401874 WASF1Q92558 559 aa19.67■□□□□ 0.74
TSC2-204ENST00000401874 H0YHG0 523 aa19.66■□□□□ 0.74
TSC2-204ENST00000401874 PDCL2Q8N4E4 241 aa19.66■□□□□ 0.74
TSC2-204ENST00000401874 LUC7LQ9NQ29 371 aaKnown RBP19.66■□□□□ 0.74
TSC2-204ENST00000401874 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
TSC2-204ENST00000401874 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
TSC2-204ENST00000401874 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
TSC2-204ENST00000401874 EIF3JO75822 258 aaKnown RBP19.65■□□□□ 0.74
TSC2-204ENST00000401874 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
TSC2-204ENST00000401874 ODF2Q5BJF6 829 aa19.65■□□□□ 0.74
TSC2-204ENST00000401874 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
TSC2-204ENST00000401874 ADGRF5Q8IZF2 1346 aa19.65■□□□□ 0.74
TSC2-204ENST00000401874 FILIP1Q7Z7B0 1213 aa19.65■□□□□ 0.74
TSC2-204ENST00000401874 FAM177BA6PVY3 158 aa19.64■□□□□ 0.74
TSC2-204ENST00000401874 IGHDP01880 384 aa19.64■□□□□ 0.73
TSC2-204ENST00000401874 IMMTQ16891 758 aaKnown RBP19.64■□□□□ 0.73
TSC2-204ENST00000401874 HSP90AB2PQ58FF8 381 aa19.64■□□□□ 0.73
TSC2-204ENST00000401874 AXDND1Q5T1B0 1012 aaPredicted RBP19.64■□□□□ 0.73
TSC2-204ENST00000401874 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
TSC2-204ENST00000401874 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
TSC2-204ENST00000401874 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
TSC2-204ENST00000401874 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
TSC2-204ENST00000401874 LIMCH1Q9UPQ0 1083 aa19.62■□□□□ 0.73
TSC2-204ENST00000401874 KCNH5Q8NCM2 988 aa19.62■□□□□ 0.73
TSC2-204ENST00000401874 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
TSC2-204ENST00000401874 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
TSC2-204ENST00000401874 HDAC1Q13547 482 aaPredicted RBP19.62■□□□□ 0.73
TSC2-204ENST00000401874 NUP133Q8WUM0 1156 aa19.62■□□□□ 0.73
TSC2-204ENST00000401874 ANO10Q9NW15 660 aa19.62■□□□□ 0.73
TSC2-204ENST00000401874 KRT18P05783 430 aaKnown RBP19.61■□□□□ 0.73
TSC2-204ENST00000401874 DDX11Q96FC9 970 aa19.61■□□□□ 0.73
TSC2-204ENST00000401874 PKNOX2Q96KN3 472 aa19.61■□□□□ 0.73
TSC2-204ENST00000401874 CAMK4Q16566 473 aa19.61■□□□□ 0.73
TSC2-204ENST00000401874 MCM5P33992 734 aa19.61■□□□□ 0.73
TSC2-204ENST00000401874 FERMT3Q86UX7 667 aa19.61■□□□□ 0.73
TSC2-204ENST00000401874 RDXP35241 583 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms