RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
PDGFA-202ENST00000400761 ADCY9O60503 1353 aa24.42■■□□□ 1.5
PDGFA-202ENST00000400761 HSPA5P11021 654 aaKnown RBP24.41■■□□□ 1.5
PDGFA-202ENST00000400761 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
PDGFA-202ENST00000400761 MON2Q7Z3U7 1717 aa24.41■■□□□ 1.5
PDGFA-202ENST00000400761 USP31Q70CQ4 1352 aa24.41■■□□□ 1.5
PDGFA-202ENST00000400761 DDX54Q8TDD1 881 aaKnown RBP24.39■■□□□ 1.49
PDGFA-202ENST00000400761 COL23A1Q86Y22 540 aaPredicted RBP24.37■■□□□ 1.49
PDGFA-202ENST00000400761 DOT1LQ8TEK3 1739 aa24.37■■□□□ 1.49
PDGFA-202ENST00000400761 SBNO2Q9Y2G9 1366 aa24.37■■□□□ 1.49
PDGFA-202ENST00000400761 MSH5O43196 834 aa24.36■■□□□ 1.49
PDGFA-202ENST00000400761 PRIM1P49642 420 aaKnown RBP24.36■■□□□ 1.49
PDGFA-202ENST00000400761 ZNF526Q8TF50 670 aaPredicted RBP24.36■■□□□ 1.49
PDGFA-202ENST00000400761 SYTL4Q96C24 671 aaPredicted RBP24.36■■□□□ 1.49
PDGFA-202ENST00000400761 ANKRD36BQ8N2N9 1353 aa24.36■■□□□ 1.49
PDGFA-202ENST00000400761 NSD2O96028 1365 aa24.35■■□□□ 1.49
PDGFA-202ENST00000400761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
PDGFA-202ENST00000400761 TESK2Q96S53 571 aa24.35■■□□□ 1.49
PDGFA-202ENST00000400761 CCNL1Q9UK58 526 aaPredicted RBP24.34■■□□□ 1.49
PDGFA-202ENST00000400761 CD2APQ9Y5K6 639 aa24.34■■□□□ 1.49
PDGFA-202ENST00000400761 MSL1Q68DK7 614 aa24.33■■□□□ 1.49
PDGFA-202ENST00000400761 NME9Q86XW9 330 aa24.32■■□□□ 1.48
PDGFA-202ENST00000400761 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
PDGFA-202ENST00000400761 KIF3CO14782 793 aa24.27■■□□□ 1.48
PDGFA-202ENST00000400761 CD163L1Q9NR16 1453 aa24.26■■□□□ 1.47
PDGFA-202ENST00000400761 IP6K1Q92551 441 aa24.26■■□□□ 1.47
PDGFA-202ENST00000400761 C5P01031 1676 aa24.25■■□□□ 1.47
PDGFA-202ENST00000400761 TMF1P82094 1093 aa24.25■■□□□ 1.47
PDGFA-202ENST00000400761 APLP1P51693 650 aa24.23■■□□□ 1.47
PDGFA-202ENST00000400761 ZCRB1Q8TBF4 217 aaKnown RBP24.23■■□□□ 1.47
PDGFA-202ENST00000400761 LTV1Q96GA3 475 aaPredicted RBP24.23■■□□□ 1.47
PDGFA-202ENST00000400761 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
PDGFA-202ENST00000400761 FLAD1Q8NFF5 587 aa24.22■■□□□ 1.47
PDGFA-202ENST00000400761 TAF1LQ8IZX4 1826 aa24.21■■□□□ 1.47
PDGFA-202ENST00000400761 IGSF1Q8N6C5 1336 aa24.2■■□□□ 1.46
PDGFA-202ENST00000400761 DNAJC5GQ8N7S2 189 aa24.2■■□□□ 1.46
PDGFA-202ENST00000400761 EDC4Q6P2E9 1401 aaKnown RBP24.19■■□□□ 1.46
PDGFA-202ENST00000400761 RGPD2P0DJD1 1756 aa24.19■■□□□ 1.46
PDGFA-202ENST00000400761 MEGF6O75095 1541 aa24.19■■□□□ 1.46
PDGFA-202ENST00000400761 HDGFL2Q7Z4V5 671 aaPredicted RBP24.18■■□□□ 1.46
PDGFA-202ENST00000400761 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
PDGFA-202ENST00000400761 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
PDGFA-202ENST00000400761 POLR3GLQ9BT43 218 aa24.16■■□□□ 1.46
PDGFA-202ENST00000400761 CDCA8Q53HL2 280 aa24.15■■□□□ 1.46
PDGFA-202ENST00000400761 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
PDGFA-202ENST00000400761 CICQ96RK0 1608 aaPredicted RBP24.14■■□□□ 1.46
PDGFA-202ENST00000400761 PUS7Q96PZ0 661 aaKnown RBP24.14■■□□□ 1.45
PDGFA-202ENST00000400761 SLC12A5Q9H2X9 1139 aa24.14■■□□□ 1.45
PDGFA-202ENST00000400761 TOMM70O94826 608 aa24.13■■□□□ 1.45
PDGFA-202ENST00000400761 HOXC9P31274 260 aa24.13■■□□□ 1.45
PDGFA-202ENST00000400761 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
PDGFA-202ENST00000400761 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
PDGFA-202ENST00000400761 PALLDQ8WX93 1383 aa24.12■■□□□ 1.45
PDGFA-202ENST00000400761 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
PDGFA-202ENST00000400761 MAP3K19Q56UN5 1328 aa24.11■■□□□ 1.45
PDGFA-202ENST00000400761 UBR3Q6ZT12 1888 aa24.11■■□□□ 1.45
PDGFA-202ENST00000400761 A0A1W2PP64 1363 aa24.11■■□□□ 1.45
PDGFA-202ENST00000400761 AMIGO3Q86WK7 504 aa24.1■■□□□ 1.45
PDGFA-202ENST00000400761 TERF2IPQ9NYB0 399 aa24.1■■□□□ 1.45
PDGFA-202ENST00000400761 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
PDGFA-202ENST00000400761 AK7Q96M32 723 aa24.09■■□□□ 1.45
PDGFA-202ENST00000400761 WDR90Q96KV7 1748 aa24.09■■□□□ 1.45
PDGFA-202ENST00000400761 AMPHP49418 695 aa24.08■■□□□ 1.45
PDGFA-202ENST00000400761 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.44
PDGFA-202ENST00000400761 PHF14O94880 888 aa24.06■■□□□ 1.44
PDGFA-202ENST00000400761 COL13A1Q5TAT6 717 aaPredicted RBP24.06■■□□□ 1.44
PDGFA-202ENST00000400761 NBPF6Q5VWK0 638 aa24.06■■□□□ 1.44
PDGFA-202ENST00000400761 NBPF4Q96M43 638 aa24.06■■□□□ 1.44
PDGFA-202ENST00000400761 NSD3Q9BZ95 1437 aa24.06■■□□□ 1.44
PDGFA-202ENST00000400761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.05■■□□□ 1.44
PDGFA-202ENST00000400761 FBLN1P23142 703 aa24.05■■□□□ 1.44
PDGFA-202ENST00000400761 SMIM5Q71RC9 77 aa24.05■■□□□ 1.44
PDGFA-202ENST00000400761 MPRIPQ6WCQ1 1025 aa24.04■■□□□ 1.44
PDGFA-202ENST00000400761 RAPGEF4Q8WZA2 1011 aa24.04■■□□□ 1.44
PDGFA-202ENST00000400761 COG3Q96JB2 828 aa24.04■■□□□ 1.44
PDGFA-202ENST00000400761 ITGB4P16144 1822 aa24.03■■□□□ 1.44
PDGFA-202ENST00000400761 USHBP1Q8N6Y0 703 aa24.03■■□□□ 1.44
PDGFA-202ENST00000400761 SSFA2P28290 1259 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 SMARCC1Q92922 1105 aaPredicted RBP24.02■■□□□ 1.44
PDGFA-202ENST00000400761 NMRK2Q9NPI5 230 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 KIF13BQ9NQT8 1826 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 PCDH11XQ9BZA7 1347 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 PCDH11YQ9BZA8 1340 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 RTL1A6NKG5 1358 aa24.02■■□□□ 1.44
PDGFA-202ENST00000400761 KIAA1551Q9HCM1 1747 aa24.01■■□□□ 1.43
PDGFA-202ENST00000400761 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
PDGFA-202ENST00000400761 JMYQ8N9B5 988 aa24.01■■□□□ 1.43
PDGFA-202ENST00000400761 KLRG1Q96E93 195 aa24.01■■□□□ 1.43
PDGFA-202ENST00000400761 PCNTO95613 3336 aa24.01■■□□□ 1.43
PDGFA-202ENST00000400761 PXDNLA1KZ92 1463 aa24■■□□□ 1.43
PDGFA-202ENST00000400761 RBM46Q8TBY0 533 aaKnown RBP24■■□□□ 1.43
PDGFA-202ENST00000400761 N4BP2Q86UW6 1770 aaPredicted RBP23.99■■□□□ 1.43
PDGFA-202ENST00000400761 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
PDGFA-202ENST00000400761 CAPN15O75808 1086 aa23.99■■□□□ 1.43
PDGFA-202ENST00000400761 ZNF316A6NFI3 1004 aaPredicted RBP23.98■■□□□ 1.43
PDGFA-202ENST00000400761 HTRA3P83110 453 aa23.98■■□□□ 1.43
PDGFA-202ENST00000400761 SMG6Q86US8 1419 aaKnown RBP23.96■■□□□ 1.43
PDGFA-202ENST00000400761 CYP27B1O15528 508 aa23.96■■□□□ 1.43
PDGFA-202ENST00000400761 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
PDGFA-202ENST00000400761 TGFB2P61812 414 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms