RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
LINC00649-202ENST00000400353 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
LINC00649-202ENST00000400353 CRB1P82279 1406 aa13.55□□□□□ -0.24
LINC00649-202ENST00000400353 NLRP6P59044 892 aa13.54□□□□□ -0.24
LINC00649-202ENST00000400353 NUCB1Q02818 461 aa13.54□□□□□ -0.24
LINC00649-202ENST00000400353 RTF1Q92541 710 aaKnown RBP13.54□□□□□ -0.24
LINC00649-202ENST00000400353 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
LINC00649-202ENST00000400353 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
LINC00649-202ENST00000400353 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
LINC00649-202ENST00000400353 USP19O94966 1318 aa13.53□□□□□ -0.24
LINC00649-202ENST00000400353 PTPRCP08575 1304 aa13.53□□□□□ -0.24
LINC00649-202ENST00000400353 BECN1Q14457 450 aa13.52□□□□□ -0.24
LINC00649-202ENST00000400353 NBR1Q14596 966 aa13.52□□□□□ -0.24
LINC00649-202ENST00000400353 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.24
LINC00649-202ENST00000400353 ELL2O00472 640 aaPredicted RBP13.52□□□□□ -0.25
LINC00649-202ENST00000400353 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
LINC00649-202ENST00000400353 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.25
LINC00649-202ENST00000400353 SOX12O15370 315 aa13.51□□□□□ -0.25
LINC00649-202ENST00000400353 EYA1Q99502 592 aa13.51□□□□□ -0.25
LINC00649-202ENST00000400353 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
LINC00649-202ENST00000400353 HOXC9P31274 260 aa13.51□□□□□ -0.25
LINC00649-202ENST00000400353 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
LINC00649-202ENST00000400353 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
LINC00649-202ENST00000400353 MCM10Q7L590 875 aa13.51□□□□□ -0.25
LINC00649-202ENST00000400353 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
LINC00649-202ENST00000400353 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
LINC00649-202ENST00000400353 CHD1LQ86WJ1 897 aa13.5□□□□□ -0.25
LINC00649-202ENST00000400353 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
LINC00649-202ENST00000400353 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
LINC00649-202ENST00000400353 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
LINC00649-202ENST00000400353 SEC24BO95487 1268 aa13.48□□□□□ -0.25
LINC00649-202ENST00000400353 NWD1Q149M9 1564 aa13.48□□□□□ -0.25
LINC00649-202ENST00000400353 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
LINC00649-202ENST00000400353 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
LINC00649-202ENST00000400353 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
LINC00649-202ENST00000400353 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
LINC00649-202ENST00000400353 RGS12O14924 1447 aa13.46□□□□□ -0.25
LINC00649-202ENST00000400353 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
LINC00649-202ENST00000400353 NFAT5O94916 1531 aa13.46□□□□□ -0.25
LINC00649-202ENST00000400353 MAP3K5Q99683 1374 aa13.46□□□□□ -0.26
LINC00649-202ENST00000400353 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.26
LINC00649-202ENST00000400353 IP6K1Q92551 441 aa13.46□□□□□ -0.26
LINC00649-202ENST00000400353 BMP2KLQ5H9B9 411 aa13.45□□□□□ -0.26
LINC00649-202ENST00000400353 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 LTN1O94822 1766 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 FOXO3O43524 673 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 PSME1Q06323 249 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 STRCQ7RTU9 1775 aa13.44□□□□□ -0.26
LINC00649-202ENST00000400353 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
LINC00649-202ENST00000400353 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
LINC00649-202ENST00000400353 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 ANKRD44Q8N8A2 993 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 C1orf115Q9H7X2 142 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
LINC00649-202ENST00000400353 ESCO1Q5FWF5 840 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 C22orf23Q9BZE7 217 aa13.43□□□□□ -0.26
LINC00649-202ENST00000400353 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
LINC00649-202ENST00000400353 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
LINC00649-202ENST00000400353 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
LINC00649-202ENST00000400353 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
LINC00649-202ENST00000400353 SLIT3O75094 1523 aa13.42□□□□□ -0.26
LINC00649-202ENST00000400353 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
LINC00649-202ENST00000400353 MSH6P52701 1360 aa13.41□□□□□ -0.26
LINC00649-202ENST00000400353 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
LINC00649-202ENST00000400353 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
LINC00649-202ENST00000400353 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
LINC00649-202ENST00000400353 HMMRO75330 724 aa13.4□□□□□ -0.26
LINC00649-202ENST00000400353 MFAP1P55081 439 aaKnown RBP13.4□□□□□ -0.26
LINC00649-202ENST00000400353 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
LINC00649-202ENST00000400353 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
LINC00649-202ENST00000400353 NFKBIBQ15653 356 aa13.4□□□□□ -0.27
LINC00649-202ENST00000400353 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.27
LINC00649-202ENST00000400353 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
LINC00649-202ENST00000400353 CEP85Q6P2H3 762 aa13.39□□□□□ -0.27
LINC00649-202ENST00000400353 LTV1Q96GA3 475 aaPredicted RBP13.39□□□□□ -0.27
LINC00649-202ENST00000400353 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
LINC00649-202ENST00000400353 MST1RQ04912 1400 aa13.39□□□□□ -0.27
LINC00649-202ENST00000400353 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-202ENST00000400353 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
LINC00649-202ENST00000400353 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
LINC00649-202ENST00000400353 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
LINC00649-202ENST00000400353 ZMYND15Q9H091 742 aa13.38□□□□□ -0.27
LINC00649-202ENST00000400353 NCAPD2Q15021 1401 aa13.38□□□□□ -0.27
LINC00649-202ENST00000400353 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
LINC00649-202ENST00000400353 HOXB7P09629 217 aa13.37□□□□□ -0.27
LINC00649-202ENST00000400353 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-202ENST00000400353 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-202ENST00000400353 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
LINC00649-202ENST00000400353 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms