RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 CGNL1Q0VF96 1302 aa10.64□□□□□ -0.71
LINC02408-201ENST00000400306 NUP188Q5SRE5 1749 aa10.63□□□□□ -0.71
LINC02408-201ENST00000400306 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
LINC02408-201ENST00000400306 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
LINC02408-201ENST00000400306 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
LINC02408-201ENST00000400306 SBNO1A3KN83 1393 aa10.63□□□□□ -0.71
LINC02408-201ENST00000400306 SOX12O15370 315 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 TNNT2P45379 298 aaPredicted RBP10.62□□□□□ -0.71
LINC02408-201ENST00000400306 SPATA31A3Q5VYP0 1347 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 USP54Q70EL1 1684 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
LINC02408-201ENST00000400306 CRYBG1Q9Y4K1 1723 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 NRAPQ86VF7 1730 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 OVOS2A0A0J9YW53 1432 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 OVOS2Q6IE36 1432 aa10.62□□□□□ -0.71
LINC02408-201ENST00000400306 DISP2A7MBM2 1401 aa10.61□□□□□ -0.71
LINC02408-201ENST00000400306 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
LINC02408-201ENST00000400306 POTEFA5A3E0 1075 aa10.61□□□□□ -0.71
LINC02408-201ENST00000400306 FBLN1P23142 703 aa10.61□□□□□ -0.71
LINC02408-201ENST00000400306 PSEN1P49768 467 aa10.61□□□□□ -0.71
LINC02408-201ENST00000400306 NLRP6P59044 892 aa10.61□□□□□ -0.71
LINC02408-201ENST00000400306 PDAP1Q13442 181 aaKnown RBP10.6□□□□□ -0.71
LINC02408-201ENST00000400306 VPS72Q15906 364 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 MORC1Q86VD1 984 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 CABLES1Q8TDN4 633 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 COG3Q96JB2 828 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 NSD2O96028 1365 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 ONECUT3O60422 494 aaPredicted RBP10.6□□□□□ -0.71
LINC02408-201ENST00000400306 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
LINC02408-201ENST00000400306 USP31Q70CQ4 1352 aa10.59□□□□□ -0.71
LINC02408-201ENST00000400306 NPC1L1Q9UHC9 1359 aa10.59□□□□□ -0.71
LINC02408-201ENST00000400306 MAP2P11137 1827 aaKnown RBP10.59□□□□□ -0.71
LINC02408-201ENST00000400306 ANP32CO43423 234 aa10.59□□□□□ -0.71
LINC02408-201ENST00000400306 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
LINC02408-201ENST00000400306 MAMSTRQ6ZN01 415 aa10.59□□□□□ -0.71
LINC02408-201ENST00000400306 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
LINC02408-201ENST00000400306 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
LINC02408-201ENST00000400306 ARHGEF10O15013 1369 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 PARD3Q8TEW0 1356 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 LTN1O94822 1766 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 SLIT3O75094 1523 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 A0A0G2JS52 829 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 ZBTB7CA1YPR0 619 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
LINC02408-201ENST00000400306 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
LINC02408-201ENST00000400306 NFAT5O94916 1531 aa10.58□□□□□ -0.72
LINC02408-201ENST00000400306 NLRP13Q86W25 1043 aa10.57□□□□□ -0.72
LINC02408-201ENST00000400306 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
LINC02408-201ENST00000400306 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
LINC02408-201ENST00000400306 USP19O94966 1318 aa10.57□□□□□ -0.72
LINC02408-201ENST00000400306 PLCG2P16885 1265 aa10.57□□□□□ -0.72
LINC02408-201ENST00000400306 EZH2Q15910 746 aaKnown RBP10.57□□□□□ -0.72
LINC02408-201ENST00000400306 C1QTNF8P60827 252 aa10.56□□□□□ -0.72
LINC02408-201ENST00000400306 RRS1Q15050 365 aaKnown RBP10.56□□□□□ -0.72
LINC02408-201ENST00000400306 THSD7AQ9UPZ6 1657 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 SCUBE2Q9NQ36 999 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 RGPD5Q99666 1765 aa10.55□□□□□ -0.72
LINC02408-201ENST00000400306 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
LINC02408-201ENST00000400306 ZC3H6P61129 1189 aaKnown RBP10.54□□□□□ -0.72
LINC02408-201ENST00000400306 MKRN3Q13064 507 aaKnown RBP10.54□□□□□ -0.72
LINC02408-201ENST00000400306 RALBP1Q15311 655 aa10.54□□□□□ -0.72
LINC02408-201ENST00000400306 PPM1GO15355 546 aaPredicted RBP10.54□□□□□ -0.72
LINC02408-201ENST00000400306 GCP02774 474 aa10.54□□□□□ -0.72
LINC02408-201ENST00000400306 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
LINC02408-201ENST00000400306 CCDC184Q52MB2 194 aa10.54□□□□□ -0.72
LINC02408-201ENST00000400306 MYBBP1AQ9BQG0 1328 aaKnown RBP10.53□□□□□ -0.72
LINC02408-201ENST00000400306 COL14A1Q05707 1796 aaKnown RBP10.53□□□□□ -0.72
LINC02408-201ENST00000400306 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
LINC02408-201ENST00000400306 MTHFSP49914 203 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 CHRNA2Q15822 529 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 CAMKK2Q96RR4 588 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 OCEL1Q9H607 264 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 SPON1Q9HCB6 807 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 POLKQ9UBT6 870 aa10.52□□□□□ -0.72
LINC02408-201ENST00000400306 AATKQ6ZMQ8 1374 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 KIAA0232Q92628 1395 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
LINC02408-201ENST00000400306 FAM182BQ5T319 152 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 KCNH5Q8NCM2 988 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 COL18A1P39060 1754 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
LINC02408-201ENST00000400306 RIOK3O14730 519 aaKnown RBP10.5□□□□□ -0.73
LINC02408-201ENST00000400306 KCNQ2O43526 872 aa10.5□□□□□ -0.73
LINC02408-201ENST00000400306 CENPBP07199 599 aaPredicted RBP10.5□□□□□ -0.73
LINC02408-201ENST00000400306 AMPHP49418 695 aa10.5□□□□□ -0.73
LINC02408-201ENST00000400306 SMG6Q86US8 1419 aaKnown RBP10.5□□□□□ -0.73
LINC02408-201ENST00000400306 RGPD2P0DJD1 1756 aa10.5□□□□□ -0.73
LINC02408-201ENST00000400306 NBPF14Q5TI25 921 aa10.49□□□□□ -0.73
LINC02408-201ENST00000400306 ARHGEF25Q86VW2 580 aa10.49□□□□□ -0.73
LINC02408-201ENST00000400306 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
LINC02408-201ENST00000400306 LMO7Q8WWI1 1683 aa10.49□□□□□ -0.73
LINC02408-201ENST00000400306 HOXC9P31274 260 aa10.49□□□□□ -0.73
LINC02408-201ENST00000400306 LTV1Q96GA3 475 aaPredicted RBP10.49□□□□□ -0.73
LINC02408-201ENST00000400306 PRDM11Q9NQV5 511 aa10.49□□□□□ -0.73
LINC02408-201ENST00000400306 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
LINC02408-201ENST00000400306 RGPD4Q7Z3J3 1758 aa10.48□□□□□ -0.73
LINC02408-201ENST00000400306 HSP90AB2PQ58FF8 381 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms