RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
CSMD1-202ENST00000400186 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
CSMD1-202ENST00000400186 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
CSMD1-202ENST00000400186 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
CSMD1-202ENST00000400186 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 KRT32Q14532 448 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 BCAR3O75815 825 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 CAMK4Q16566 473 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 NCOA2Q15596 1464 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 CASQ1P31415 396 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 NLRP6P59044 892 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 KIF5CO60282 957 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 CCDC183Q5T5S1 534 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 WASF1Q92558 559 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 ZSCAN12O43309 604 aa11.24□□□□□ -0.61
CSMD1-202ENST00000400186 ABTB2Q8N961 1025 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 FANCD2Q9BXW9 1451 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 SPA17Q15506 151 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
CSMD1-202ENST00000400186 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 PLEKHO1Q53GL0 409 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-202ENST00000400186 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 TDO2P48775 406 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-202ENST00000400186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.23□□□□□ -0.61
CSMD1-202ENST00000400186 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 CADPSQ9ULU8 1353 aa11.23□□□□□ -0.61
CSMD1-202ENST00000400186 FAM177BA6PVY3 158 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 MATR3P43243 847 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSMD1-202ENST00000400186 ZSCAN25Q6NSZ9 544 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 CEP131Q9UPN4 1083 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSMD1-202ENST00000400186 LUZP1Q86V48 1076 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 CGNQ9P2M7 1197 aaKnown RBP11.22□□□□□ -0.61
CSMD1-202ENST00000400186 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-202ENST00000400186 POLA1P09884 1462 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-202ENST00000400186 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 CCDC113Q9H0I3 377 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
CSMD1-202ENST00000400186 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 MPHOSPH8Q99549 860 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 PLEKHH2Q8IVE3 1493 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
CSMD1-202ENST00000400186 CBX1P83916 185 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 VPS36Q86VN1 386 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 NF2P35240 595 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 RAI14Q9P0K7 980 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 ERBINQ96RT1 1412 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 CASKIN1Q8WXD9 1431 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 CETN2P41208 172 aa11.2□□□□□ -0.62
CSMD1-202ENST00000400186 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 ANAPC15P60006 121 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 RNF187Q5TA31 235 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 NEBLO76041 1014 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 IBSPP21815 317 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-202ENST00000400186 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 KLHL10Q6JEL2 608 aa11.19□□□□□ -0.62
CSMD1-202ENST00000400186 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 FKBP15Q5T1M5 1219 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 PIBF1Q8WXW3 757 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 ZNF76P36508 570 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 SMC1AQ14683 1233 aaKnown RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 STAMBPO95630 424 aa11.18□□□□□ -0.62
CSMD1-202ENST00000400186 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
CSMD1-202ENST00000400186 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-202ENST00000400186 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-202ENST00000400186 C9orf84Q5VXU9 1444 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 CCDC175P0C221 793 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 MYL6BP14649 208 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 CFTRP13569 1480 aa11.17□□□□□ -0.62
CSMD1-202ENST00000400186 GCOM1H8Y6P7 765 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-202ENST00000400186 MYZAPP0CAP1 466 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms