RNA–Protein interactions for RNA: ENST00000399609.7

SRL-201, Transcript of sarcalumenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRL, Length 4,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-201ENST00000399609 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
SRL-201ENST00000399609 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
SRL-201ENST00000399609 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
SRL-201ENST00000399609 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
SRL-201ENST00000399609 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
SRL-201ENST00000399609 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 DCAF5Q96JK2 942 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 GNL3LQ9NVN8 582 aaKnown RBP10.54□□□□□ -0.72
SRL-201ENST00000399609 ARHGEF40Q8TER5 1519 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 APAF1O14727 1248 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 CDK11BP21127 795 aaKnown RBP10.54□□□□□ -0.72
SRL-201ENST00000399609 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
SRL-201ENST00000399609 ABT1Q9ULW3 272 aaKnown RBP10.54□□□□□ -0.72
SRL-201ENST00000399609 CCDC7Q96M83 1385 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 ROBO2Q9HCK4 1378 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 MYO1BO43795 1136 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 ZC3H12CQ9C0D7 883 aaKnown RBP10.53□□□□□ -0.72
SRL-201ENST00000399609 MAP3K1Q13233 1512 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 FYB1O15117 783 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 CCDC57Q2TAC2 916 aa10.53□□□□□ -0.72
SRL-201ENST00000399609 DZIP3Q86Y13 1208 aaKnown RBP10.53□□□□□ -0.72
SRL-201ENST00000399609 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
SRL-201ENST00000399609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.52□□□□□ -0.72
SRL-201ENST00000399609 HMMRO75330 724 aa10.52□□□□□ -0.72
SRL-201ENST00000399609 ABCA9Q8IUA7 1624 aa10.52□□□□□ -0.72
SRL-201ENST00000399609 MAP3K19Q56UN5 1328 aa10.52□□□□□ -0.73
SRL-201ENST00000399609 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.73
SRL-201ENST00000399609 CHAF1AQ13111 956 aaPredicted RBP10.52□□□□□ -0.73
SRL-201ENST00000399609 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
SRL-201ENST00000399609 MBD5Q9P267 1494 aa10.52□□□□□ -0.73
SRL-201ENST00000399609 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
SRL-201ENST00000399609 HSP90AA1P07900 732 aaKnown RBP10.51□□□□□ -0.73
SRL-201ENST00000399609 SNRPA1P09661 255 aaKnown RBP10.51□□□□□ -0.73
SRL-201ENST00000399609 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 CAPN15O75808 1086 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 HOXC9P31274 260 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
SRL-201ENST00000399609 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 RSPH6AQ9H0K4 717 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
SRL-201ENST00000399609 G3BP1Q13283 466 aaKnown RBP eCLIP10.51□□□□□ -0.73
SRL-201ENST00000399609 HDAC9Q9UKV0 1011 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 WDR17Q8IZU2 1322 aa10.51□□□□□ -0.73
SRL-201ENST00000399609 ECM2O94769 699 aaPredicted RBP10.5□□□□□ -0.73
SRL-201ENST00000399609 IKQ13123 557 aaPredicted RBP10.5□□□□□ -0.73
SRL-201ENST00000399609 MCM10Q7L590 875 aa10.5□□□□□ -0.73
SRL-201ENST00000399609 RUNDC1Q96C34 613 aa10.5□□□□□ -0.73
SRL-201ENST00000399609 DALRD3Q5D0E6 543 aaKnown RBP10.5□□□□□ -0.73
SRL-201ENST00000399609 C2CD5Q86YS7 1000 aa10.5□□□□□ -0.73
SRL-201ENST00000399609 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
SRL-201ENST00000399609 CCDC24Q8N4L8 307 aa10.5□□□□□ -0.73
SRL-201ENST00000399609 SHROOM2Q13796 1616 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 MMP10P09238 476 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 LOC102724428A0A0B4J2F2 783 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 SIK1P57059 783 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 AGLP35573 1532 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 FLT4P35916 1363 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 NIM1KQ8IY84 436 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
SRL-201ENST00000399609 PDE6BP35913 854 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 RNF181Q9P0P0 153 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 H7C1D1 291 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 DHX16O60231 1041 aaKnown RBP10.48□□□□□ -0.73
SRL-201ENST00000399609 APPP05067 770 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
SRL-201ENST00000399609 KDM5CP41229 1560 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 KCNQ2O43526 872 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 CNKSR1Q969H4 720 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 EYA3Q99504 573 aa10.48□□□□□ -0.73
SRL-201ENST00000399609 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
SRL-201ENST00000399609 CPS1P31327 1500 aa10.47□□□□□ -0.73
SRL-201ENST00000399609 DCTN1Q14203 1278 aa10.47□□□□□ -0.73
SRL-201ENST00000399609 PIK3C2GO75747 1445 aa10.47□□□□□ -0.73
SRL-201ENST00000399609 ATP2B2Q01814 1243 aa10.47□□□□□ -0.73
SRL-201ENST00000399609 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
SRL-201ENST00000399609 FAM135BQ49AJ0 1406 aa10.46□□□□□ -0.73
SRL-201ENST00000399609 NINLQ9Y2I6 1382 aa10.46□□□□□ -0.73
SRL-201ENST00000399609 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.73
SRL-201ENST00000399609 RIMBP2O15034 1052 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 CLSTN1O94985 981 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 ABCC3O15438 1527 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 KDM2BQ8NHM5 1336 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 DNAJC10Q8IXB1 793 aa10.46□□□□□ -0.74
SRL-201ENST00000399609 LRRFIP1Q32MZ4 808 aaKnown RBP10.45□□□□□ -0.74
SRL-201ENST00000399609 EYA1Q99502 592 aa10.45□□□□□ -0.74
SRL-201ENST00000399609 MAP3K4Q9Y6R4 1608 aa10.45□□□□□ -0.74
SRL-201ENST00000399609 CEP170BQ9Y4F5 1589 aaPredicted RBP10.45□□□□□ -0.74
SRL-201ENST00000399609 PIP4K2AP48426 406 aaPredicted RBP10.45□□□□□ -0.74
SRL-201ENST00000399609 UPF1Q92900 1129 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRL-201ENST00000399609 TCIRG1Q13488 830 aa10.45□□□□□ -0.74
SRL-201ENST00000399609 SOGA3Q5TF21 947 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms