RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 AMPHP49418 695 aa17.14■□□□□ 0.33
PTPN6-202ENST00000399448 KDRP35968 1356 aa17.14■□□□□ 0.33
PTPN6-202ENST00000399448 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
PTPN6-202ENST00000399448 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
PTPN6-202ENST00000399448 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
PTPN6-202ENST00000399448 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
PTPN6-202ENST00000399448 FMN2Q9NZ56 1722 aa17.13■□□□□ 0.33
PTPN6-202ENST00000399448 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
PTPN6-202ENST00000399448 RIMS1Q86UR5 1692 aaKnown RBP17.12■□□□□ 0.33
PTPN6-202ENST00000399448 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-202ENST00000399448 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
PTPN6-202ENST00000399448 RGS12O14924 1447 aa17.12■□□□□ 0.33
PTPN6-202ENST00000399448 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
PTPN6-202ENST00000399448 EYA1Q99502 592 aa17.12■□□□□ 0.33
PTPN6-202ENST00000399448 NLRP6P59044 892 aa17.11■□□□□ 0.33
PTPN6-202ENST00000399448 FOXO3O43524 673 aa17.11■□□□□ 0.33
PTPN6-202ENST00000399448 KCNA6P17658 529 aa17.11■□□□□ 0.33
PTPN6-202ENST00000399448 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
PTPN6-202ENST00000399448 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
PTPN6-202ENST00000399448 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
PTPN6-202ENST00000399448 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
PTPN6-202ENST00000399448 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
PTPN6-202ENST00000399448 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
PTPN6-202ENST00000399448 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.33
PTPN6-202ENST00000399448 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
PTPN6-202ENST00000399448 CEP170BQ9Y4F5 1589 aaPredicted RBP17.07■□□□□ 0.32
PTPN6-202ENST00000399448 SNX21Q969T3 373 aa17.07■□□□□ 0.32
PTPN6-202ENST00000399448 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
PTPN6-202ENST00000399448 HOXC9P31274 260 aa17.06■□□□□ 0.32
PTPN6-202ENST00000399448 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
PTPN6-202ENST00000399448 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
PTPN6-202ENST00000399448 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
PTPN6-202ENST00000399448 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
PTPN6-202ENST00000399448 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
PTPN6-202ENST00000399448 CHMP5Q9NZZ3 219 aa17.05■□□□□ 0.32
PTPN6-202ENST00000399448 CDC45O75419 566 aa17.05■□□□□ 0.32
PTPN6-202ENST00000399448 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
PTPN6-202ENST00000399448 MSH6P52701 1360 aa17.05■□□□□ 0.32
PTPN6-202ENST00000399448 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
PTPN6-202ENST00000399448 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
PTPN6-202ENST00000399448 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
PTPN6-202ENST00000399448 CCT4P50991 539 aaKnown RBP17.04■□□□□ 0.32
PTPN6-202ENST00000399448 MEIS3Q99687 375 aa17.04■□□□□ 0.32
PTPN6-202ENST00000399448 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
PTPN6-202ENST00000399448 G2E3Q7L622 706 aa17.02■□□□□ 0.32
PTPN6-202ENST00000399448 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
PTPN6-202ENST00000399448 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.31
PTPN6-202ENST00000399448 STK31Q9BXU1 1019 aa17.02■□□□□ 0.31
PTPN6-202ENST00000399448 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.31
PTPN6-202ENST00000399448 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-202ENST00000399448 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
PTPN6-202ENST00000399448 KIF2CQ99661 725 aa17.01■□□□□ 0.31
PTPN6-202ENST00000399448 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
PTPN6-202ENST00000399448 HMMRO75330 724 aa17.01■□□□□ 0.31
PTPN6-202ENST00000399448 ANKLE2Q86XL3 938 aa17.01■□□□□ 0.31
PTPN6-202ENST00000399448 NWD1Q149M9 1564 aa17■□□□□ 0.31
PTPN6-202ENST00000399448 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
PTPN6-202ENST00000399448 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
PTPN6-202ENST00000399448 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
PTPN6-202ENST00000399448 LRRC37A3O60309 1634 aa17■□□□□ 0.31
PTPN6-202ENST00000399448 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
PTPN6-202ENST00000399448 MAP3K5Q99683 1374 aa16.99■□□□□ 0.31
PTPN6-202ENST00000399448 F6X3S4 739 aa16.99■□□□□ 0.31
PTPN6-202ENST00000399448 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
PTPN6-202ENST00000399448 MCM4P33991 863 aa16.98■□□□□ 0.31
PTPN6-202ENST00000399448 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-202ENST00000399448 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
PTPN6-202ENST00000399448 DDIT3P35638 169 aa16.97■□□□□ 0.31
PTPN6-202ENST00000399448 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
PTPN6-202ENST00000399448 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
PTPN6-202ENST00000399448 GNAI2P04899 355 aa16.96■□□□□ 0.31
PTPN6-202ENST00000399448 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
PTPN6-202ENST00000399448 IP6K1Q92551 441 aa16.96■□□□□ 0.31
PTPN6-202ENST00000399448 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
PTPN6-202ENST00000399448 FLIIQ13045 1269 aa16.96■□□□□ 0.31
PTPN6-202ENST00000399448 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
PTPN6-202ENST00000399448 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-202ENST00000399448 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-202ENST00000399448 GNAI3P08754 354 aa16.94■□□□□ 0.3
PTPN6-202ENST00000399448 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
PTPN6-202ENST00000399448 APBB1O00213 710 aa16.94■□□□□ 0.3
PTPN6-202ENST00000399448 SDSP20132 328 aa16.94■□□□□ 0.3
PTPN6-202ENST00000399448 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
PTPN6-202ENST00000399448 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
PTPN6-202ENST00000399448 PSME1Q06323 249 aa16.93■□□□□ 0.3
PTPN6-202ENST00000399448 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
PTPN6-202ENST00000399448 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
PTPN6-202ENST00000399448 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
PTPN6-202ENST00000399448 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
PTPN6-202ENST00000399448 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
PTPN6-202ENST00000399448 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
PTPN6-202ENST00000399448 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 NFAT5O94916 1531 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 LTN1O94822 1766 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
PTPN6-202ENST00000399448 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 RABEP1Q15276 862 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
PTPN6-202ENST00000399448 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms