RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SBF2Q86WG5 1849 aa19.16■□□□□ 0.66
HLA-DQB1-202ENST00000399079 TATP17735 454 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-202ENST00000399079 BCL11BQ9C0K0 894 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB1-202ENST00000399079 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
HLA-DQB1-202ENST00000399079 MTHFSP49914 203 aa19.15■□□□□ 0.66
HLA-DQB1-202ENST00000399079 NCAPD2Q15021 1401 aa19.14■□□□□ 0.66
HLA-DQB1-202ENST00000399079 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
HLA-DQB1-202ENST00000399079 SHANK3Q9BYB0 1731 aa19.12■□□□□ 0.65
HLA-DQB1-202ENST00000399079 IGSF1Q8N6C5 1336 aa19.12■□□□□ 0.65
HLA-DQB1-202ENST00000399079 IL13P35225 146 aa19.1■□□□□ 0.65
HLA-DQB1-202ENST00000399079 PLSCR1O15162 318 aa19.09■□□□□ 0.65
HLA-DQB1-202ENST00000399079 CYP27B1O15528 508 aa19.09■□□□□ 0.65
HLA-DQB1-202ENST00000399079 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
HLA-DQB1-202ENST00000399079 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
HLA-DQB1-202ENST00000399079 PCDH11XQ9BZA7 1347 aa19.08■□□□□ 0.65
HLA-DQB1-202ENST00000399079 PCDH11YQ9BZA8 1340 aa19.08■□□□□ 0.65
HLA-DQB1-202ENST00000399079 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.64
HLA-DQB1-202ENST00000399079 SYTL4Q96C24 671 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB1-202ENST00000399079 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
HLA-DQB1-202ENST00000399079 PRIM1P49642 420 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-202ENST00000399079 PROM2Q8N271 834 aa19.07■□□□□ 0.64
HLA-DQB1-202ENST00000399079 PSDA5PKW4 1024 aaPredicted RBP19.06■□□□□ 0.64
HLA-DQB1-202ENST00000399079 DDX10Q13206 875 aaKnown RBP19.06■□□□□ 0.64
HLA-DQB1-202ENST00000399079 SULT6B1Q6IMI4 303 aa19.05■□□□□ 0.64
HLA-DQB1-202ENST00000399079 SPG7Q9UQ90 795 aa19.05■□□□□ 0.64
HLA-DQB1-202ENST00000399079 PKD1L3Q7Z443 1732 aa19.04■□□□□ 0.64
HLA-DQB1-202ENST00000399079 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB1-202ENST00000399079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
HLA-DQB1-202ENST00000399079 RREB1Q92766 1687 aa19.04■□□□□ 0.64
HLA-DQB1-202ENST00000399079 PPP2R1AP30153 589 aa19.03■□□□□ 0.64
HLA-DQB1-202ENST00000399079 R3HDM1Q15032 1099 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-202ENST00000399079 TXNRD1Q16881 649 aa19.03■□□□□ 0.64
HLA-DQB1-202ENST00000399079 DOT1LQ8TEK3 1739 aa19.03■□□□□ 0.64
HLA-DQB1-202ENST00000399079 BTAF1O14981 1849 aa19.02■□□□□ 0.64
HLA-DQB1-202ENST00000399079 HMOX1P09601 288 aa19.02■□□□□ 0.64
HLA-DQB1-202ENST00000399079 NUP188Q5SRE5 1749 aa19.01■□□□□ 0.63
HLA-DQB1-202ENST00000399079 KDRP35968 1356 aa19.01■□□□□ 0.63
HLA-DQB1-202ENST00000399079 COL3A1P02461 1466 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB1-202ENST00000399079 PHKG2P15735 406 aa19■□□□□ 0.63
HLA-DQB1-202ENST00000399079 RGPD3A6NKT7 1758 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-202ENST00000399079 RGPD4Q7Z3J3 1758 aa19■□□□□ 0.63
HLA-DQB1-202ENST00000399079 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-202ENST00000399079 IFNL2Q8IZJ0 200 aa19■□□□□ 0.63
HLA-DQB1-202ENST00000399079 PLEKHO1Q53GL0 409 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-202ENST00000399079 MPRIPQ6WCQ1 1025 aa18.99■□□□□ 0.63
HLA-DQB1-202ENST00000399079 U2SURPO15042 1029 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-202ENST00000399079 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
HLA-DQB1-202ENST00000399079 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-202ENST00000399079 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
HLA-DQB1-202ENST00000399079 AMOTQ4VCS5 1084 aa18.97■□□□□ 0.63
HLA-DQB1-202ENST00000399079 ZNF530Q6P9A1 599 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-202ENST00000399079 LRRC4BQ9NT99 713 aa18.97■□□□□ 0.63
HLA-DQB1-202ENST00000399079 TOGARAM1Q9Y4F4 1720 aa18.97■□□□□ 0.63
HLA-DQB1-202ENST00000399079 KCNQ4P56696 695 aa18.96■□□□□ 0.63
HLA-DQB1-202ENST00000399079 CFAP53Q96M91 514 aa18.96■□□□□ 0.63
HLA-DQB1-202ENST00000399079 PIGBQ92521 554 aa18.95■□□□□ 0.62
HLA-DQB1-202ENST00000399079 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
HLA-DQB1-202ENST00000399079 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
HLA-DQB1-202ENST00000399079 ITGB4P16144 1822 aa18.91■□□□□ 0.62
HLA-DQB1-202ENST00000399079 DCAF5Q96JK2 942 aa18.91■□□□□ 0.62
HLA-DQB1-202ENST00000399079 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
HLA-DQB1-202ENST00000399079 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
HLA-DQB1-202ENST00000399079 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 MTHFSDQ2M296 383 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 SLC27A3Q5K4L6 730 aa18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 PDGFDQ9GZP0 370 aaPredicted RBP18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 CCNL1Q9UK58 526 aaPredicted RBP18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
HLA-DQB1-202ENST00000399079 PALLDQ8WX93 1383 aa18.89■□□□□ 0.62
HLA-DQB1-202ENST00000399079 RALBP1Q15311 655 aa18.89■□□□□ 0.61
HLA-DQB1-202ENST00000399079 ZNF827Q17R98 1081 aa18.89■□□□□ 0.61
HLA-DQB1-202ENST00000399079 ASAP1Q9ULH1 1129 aa18.89■□□□□ 0.61
HLA-DQB1-202ENST00000399079 LY75O60449 1722 aa18.88■□□□□ 0.61
HLA-DQB1-202ENST00000399079 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
HLA-DQB1-202ENST00000399079 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-202ENST00000399079 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
HLA-DQB1-202ENST00000399079 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
HLA-DQB1-202ENST00000399079 AKAP4Q5JQC9 854 aa18.87■□□□□ 0.61
HLA-DQB1-202ENST00000399079 RSPH6AQ9H0K4 717 aa18.87■□□□□ 0.61
HLA-DQB1-202ENST00000399079 PAPPAQ13219 1627 aa18.87■□□□□ 0.61
HLA-DQB1-202ENST00000399079 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-202ENST00000399079 CABP4P57796 275 aa18.86■□□□□ 0.61
HLA-DQB1-202ENST00000399079 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
HLA-DQB1-202ENST00000399079 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
HLA-DQB1-202ENST00000399079 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
HLA-DQB1-202ENST00000399079 SMARCC1Q92922 1105 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-202ENST00000399079 ATG3Q9NT62 314 aa18.85■□□□□ 0.61
HLA-DQB1-202ENST00000399079 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
HLA-DQB1-202ENST00000399079 MYBBP1AQ9BQG0 1328 aaKnown RBP18.83■□□□□ 0.6
HLA-DQB1-202ENST00000399079 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
HLA-DQB1-202ENST00000399079 RNMTO43148 476 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB1-202ENST00000399079 FCHSD2O94868 740 aa18.82■□□□□ 0.6
HLA-DQB1-202ENST00000399079 SIK1P57059 783 aa18.82■□□□□ 0.6
HLA-DQB1-202ENST00000399079 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
HLA-DQB1-202ENST00000399079 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
HLA-DQB1-202ENST00000399079 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
HLA-DQB1-202ENST00000399079 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
HLA-DQB1-202ENST00000399079 SCN11AQ9UI33 1791 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms