RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
CDH23-203ENST00000398788 TWISTNBQ3B726 338 aaPredicted RBP11.09□□□□□ -0.63
CDH23-203ENST00000398788 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
CDH23-203ENST00000398788 IDI1Q13907 227 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 RRS1Q15050 365 aaKnown RBP11.08□□□□□ -0.64
CDH23-203ENST00000398788 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
CDH23-203ENST00000398788 ROCK1Q13464 1354 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 VPS37DQ86XT2 251 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 ARGLU1Q9NWB6 273 aaPredicted RBP11.08□□□□□ -0.64
CDH23-203ENST00000398788 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 DRC1Q96MC2 740 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
CDH23-203ENST00000398788 ATP6V1DQ9Y5K8 247 aa11.08□□□□□ -0.64
CDH23-203ENST00000398788 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 TRIM5Q9C035 493 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 NAIPQ13075 1403 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 LOC102724159A0A0B4J2E5 919 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 DHX16O60231 1041 aaKnown RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 SETQ01105 290 aaPredicted RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 PWP2Q15269 919 aaKnown RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 ERBINQ96RT1 1412 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
CDH23-203ENST00000398788 FYB1O15117 783 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 NEK4P51957 841 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
CDH23-203ENST00000398788 TPM3P06753 285 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 LEKR1Q6ZMV7 388 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 STRN4Q9NRL3 753 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 GTF3C6Q969F1 213 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
CDH23-203ENST00000398788 ATP2B1P20020 1258 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 RBM33Q96EV2 1170 aaKnown RBP11.05□□□□□ -0.64
CDH23-203ENST00000398788 PCDHB15Q9Y5E8 787 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 HCLS1P14317 486 aaPredicted RBP11.05□□□□□ -0.64
CDH23-203ENST00000398788 TRDNQ13061 729 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
CDH23-203ENST00000398788 ABCC5O15440 1437 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 ZCCHC11Q5TAX3 1644 aaKnown RBP11.05□□□□□ -0.64
CDH23-203ENST00000398788 KDM5BQ9UGL1 1544 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 MNS1Q8NEH6 495 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 AK7Q96M32 723 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
CDH23-203ENST00000398788 FANCAO15360 1455 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 ZNF445P59923 1031 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 NFXL1Q6ZNB6 911 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 CCDC191Q8NCU4 936 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 MIS18AQ9NYP9 233 aa11.05□□□□□ -0.64
CDH23-203ENST00000398788 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
CDH23-203ENST00000398788 IBSPP21815 317 aaPredicted RBP11.04□□□□□ -0.64
CDH23-203ENST00000398788 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
CDH23-203ENST00000398788 SIL1Q9H173 461 aa11.04□□□□□ -0.64
CDH23-203ENST00000398788 RTEL1-TNFRSF6BF6WH68 1400 aa11.04□□□□□ -0.64
CDH23-203ENST00000398788 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 TDO2P48775 406 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 FSD1Q9BTV5 496 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 FIBPO43427 364 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 MAP4K4O95819 1239 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 PIP4K2BP78356 416 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 CDC45O75419 566 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 RABEP1Q15276 862 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 WAPLQ7Z5K2 1190 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 CAMSAP2Q08AD1 1489 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 KRBA2Q6ZNG9 492 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 MYCBPQ99417 103 aaPredicted RBP11.03□□□□□ -0.64
CDH23-203ENST00000398788 PRDM11Q9NQV5 511 aa11.03□□□□□ -0.64
CDH23-203ENST00000398788 LRPPRCP42704 1394 aaKnown RBP11.02□□□□□ -0.64
CDH23-203ENST00000398788 CALRP27797 417 aaKnown RBP11.02□□□□□ -0.64
CDH23-203ENST00000398788 STK11IPQ8N1F8 1099 aa11.02□□□□□ -0.64
CDH23-203ENST00000398788 TRIM29Q14134 588 aa11.02□□□□□ -0.65
CDH23-203ENST00000398788 ERC2O15083 957 aa11.02□□□□□ -0.65
CDH23-203ENST00000398788 LMAN1P49257 510 aa11.02□□□□□ -0.65
CDH23-203ENST00000398788 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
CDH23-203ENST00000398788 RALYLQ86SE5 291 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 ZNF710Q8N1W2 664 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 CWC22Q9HCG8 908 aaKnown RBP11.01□□□□□ -0.65
CDH23-203ENST00000398788 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
CDH23-203ENST00000398788 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms