RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 SULT6B1Q6IMI4 303 aa21.27■■□□□ 1
MBD1-207ENST00000398488 ZCRB1Q8TBF4 217 aaKnown RBP21.27■■□□□ 1
MBD1-207ENST00000398488 DDX54Q8TDD1 881 aaKnown RBP21.27■■□□□ 1
MBD1-207ENST00000398488 HMOX1P09601 288 aa21.25■□□□□ 0.99
MBD1-207ENST00000398488 FAM196AQ6ZSG2 479 aa21.25■□□□□ 0.99
MBD1-207ENST00000398488 KDRP35968 1356 aa21.24■□□□□ 0.99
MBD1-207ENST00000398488 TRIM37O94972 964 aa21.24■□□□□ 0.99
MBD1-207ENST00000398488 U2SURPO15042 1029 aaKnown RBP21.23■□□□□ 0.99
MBD1-207ENST00000398488 CYP27B1O15528 508 aa21.23■□□□□ 0.99
MBD1-207ENST00000398488 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
MBD1-207ENST00000398488 CFAP53Q96M91 514 aa21.22■□□□□ 0.99
MBD1-207ENST00000398488 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
MBD1-207ENST00000398488 SBF2Q86WG5 1849 aa21.21■□□□□ 0.99
MBD1-207ENST00000398488 KCNQ2O43526 872 aa21.2■□□□□ 0.98
MBD1-207ENST00000398488 ACSBG1Q96GR2 724 aa21.2■□□□□ 0.98
MBD1-207ENST00000398488 BCL9O00512 1426 aa21.2■□□□□ 0.98
MBD1-207ENST00000398488 DEFB132Q7Z7B7 95 aa21.19■□□□□ 0.98
MBD1-207ENST00000398488 TNS1Q9HBL0 1735 aaKnown RBP21.19■□□□□ 0.98
MBD1-207ENST00000398488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.98
MBD1-207ENST00000398488 CCDC184Q52MB2 194 aa21.16■□□□□ 0.98
MBD1-207ENST00000398488 SPG7Q9UQ90 795 aa21.16■□□□□ 0.98
MBD1-207ENST00000398488 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
MBD1-207ENST00000398488 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
MBD1-207ENST00000398488 U2AF1L5P0DN76 240 aaPredicted RBP21.15■□□□□ 0.98
MBD1-207ENST00000398488 U2AF1Q01081 240 aaKnown RBP eCLIP21.15■□□□□ 0.98
MBD1-207ENST00000398488 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
MBD1-207ENST00000398488 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
MBD1-207ENST00000398488 PHKG2P15735 406 aa21.14■□□□□ 0.98
MBD1-207ENST00000398488 PLEKHO1Q53GL0 409 aaPredicted RBP21.14■□□□□ 0.97
MBD1-207ENST00000398488 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
MBD1-207ENST00000398488 NUDCQ9Y266 331 aa21.14■□□□□ 0.97
MBD1-207ENST00000398488 DOT1LQ8TEK3 1739 aa21.13■□□□□ 0.97
MBD1-207ENST00000398488 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
MBD1-207ENST00000398488 PRIM1P49642 420 aaKnown RBP21.13■□□□□ 0.97
MBD1-207ENST00000398488 EN1Q05925 392 aaPredicted RBP21.13■□□□□ 0.97
MBD1-207ENST00000398488 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
MBD1-207ENST00000398488 BCL11BQ9C0K0 894 aaPredicted RBP21.13■□□□□ 0.97
MBD1-207ENST00000398488 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
MBD1-207ENST00000398488 APBA3O96018 575 aa21.12■□□□□ 0.97
MBD1-207ENST00000398488 PRKAR2BP31323 418 aa21.12■□□□□ 0.97
MBD1-207ENST00000398488 MTHFSDQ2M296 383 aaKnown RBP21.12■□□□□ 0.97
MBD1-207ENST00000398488 ZNF530Q6P9A1 599 aaPredicted RBP21.12■□□□□ 0.97
MBD1-207ENST00000398488 IFNL2Q8IZJ0 200 aa21.11■□□□□ 0.97
MBD1-207ENST00000398488 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
MBD1-207ENST00000398488 AMOTQ4VCS5 1084 aa21.1■□□□□ 0.97
MBD1-207ENST00000398488 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
MBD1-207ENST00000398488 KAT6BQ8WYB5 2073 aa21.09■□□□□ 0.97
MBD1-207ENST00000398488 ANP32CO43423 234 aa21.09■□□□□ 0.97
MBD1-207ENST00000398488 EZH2Q15910 746 aaKnown RBP21.09■□□□□ 0.97
MBD1-207ENST00000398488 CAMKK2Q96RR4 588 aa21.09■□□□□ 0.97
MBD1-207ENST00000398488 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
MBD1-207ENST00000398488 SYTL4Q96C24 671 aaPredicted RBP21.08■□□□□ 0.96
MBD1-207ENST00000398488 FCHSD2O94868 740 aa21.07■□□□□ 0.96
MBD1-207ENST00000398488 BAG6P46379 1132 aa21.07■□□□□ 0.96
MBD1-207ENST00000398488 BTAF1O14981 1849 aa21.07■□□□□ 0.96
MBD1-207ENST00000398488 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
MBD1-207ENST00000398488 PLEKHF1Q96S99 279 aa21.06■□□□□ 0.96
MBD1-207ENST00000398488 PROM2Q8N271 834 aa21.05■□□□□ 0.96
MBD1-207ENST00000398488 ITGB4P16144 1822 aa21.05■□□□□ 0.96
MBD1-207ENST00000398488 LGR6Q9HBX8 967 aa21.04■□□□□ 0.96
MBD1-207ENST00000398488 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
MBD1-207ENST00000398488 PIGBQ92521 554 aa21.04■□□□□ 0.96
MBD1-207ENST00000398488 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
MBD1-207ENST00000398488 ADAMTS8Q9UP79 889 aa21.03■□□□□ 0.96
MBD1-207ENST00000398488 PLSCR1O15162 318 aa21.02■□□□□ 0.96
MBD1-207ENST00000398488 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
MBD1-207ENST00000398488 RNMTO43148 476 aaKnown RBP20.99■□□□□ 0.95
MBD1-207ENST00000398488 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
MBD1-207ENST00000398488 CCDC146Q8IYE0 955 aa20.99■□□□□ 0.95
MBD1-207ENST00000398488 KCNQ4P56696 695 aa20.99■□□□□ 0.95
MBD1-207ENST00000398488 IL17REQ8NFR9 667 aa20.99■□□□□ 0.95
MBD1-207ENST00000398488 GAS2L2Q8NHY3 880 aa20.99■□□□□ 0.95
MBD1-207ENST00000398488 SCN11AQ9UI33 1791 aa20.98■□□□□ 0.95
MBD1-207ENST00000398488 RREB1Q92766 1687 aa20.98■□□□□ 0.95
MBD1-207ENST00000398488 ADAMTS7Q9UKP4 1686 aa20.98■□□□□ 0.95
MBD1-207ENST00000398488 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 WDR43Q15061 677 aaKnown RBP eCLIP20.97■□□□□ 0.95
MBD1-207ENST00000398488 TXNRD1Q16881 649 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
MBD1-207ENST00000398488 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
MBD1-207ENST00000398488 GNAT3A8MTJ3 354 aa20.96■□□□□ 0.95
MBD1-207ENST00000398488 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
MBD1-207ENST00000398488 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
MBD1-207ENST00000398488 MRS2Q9HD23 443 aa20.96■□□□□ 0.95
MBD1-207ENST00000398488 TMOD3Q9NYL9 352 aa20.96■□□□□ 0.95
MBD1-207ENST00000398488 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
MBD1-207ENST00000398488 NUP188Q5SRE5 1749 aa20.96■□□□□ 0.95
MBD1-207ENST00000398488 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
MBD1-207ENST00000398488 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
MBD1-207ENST00000398488 CABP4P57796 275 aa20.94■□□□□ 0.94
MBD1-207ENST00000398488 LY75O60449 1722 aa20.93■□□□□ 0.94
MBD1-207ENST00000398488 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
MBD1-207ENST00000398488 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
MBD1-207ENST00000398488 MCM10Q7L590 875 aa20.93■□□□□ 0.94
MBD1-207ENST00000398488 SLC52A2Q9HAB3 445 aa20.93■□□□□ 0.94
MBD1-207ENST00000398488 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
MBD1-207ENST00000398488 MRC1P22897 1456 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms