RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 KIF24Q5T7B8 1368 aa10.14□□□□□ -0.79
TCF4-203ENST00000398339 ZNF853P0CG23 659 aa10.14□□□□□ -0.79
TCF4-203ENST00000398339 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
TCF4-203ENST00000398339 INTS3Q68E01 1043 aaKnown RBP10.14□□□□□ -0.79
TCF4-203ENST00000398339 HDGFL2Q7Z4V5 671 aaPredicted RBP10.14□□□□□ -0.79
TCF4-203ENST00000398339 PHACTR3Q96KR7 559 aa10.14□□□□□ -0.79
TCF4-203ENST00000398339 MBIPQ9NS73 344 aa10.14□□□□□ -0.79
TCF4-203ENST00000398339 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
TCF4-203ENST00000398339 GPT2Q8TD30 523 aa10.14□□□□□ -0.79
TCF4-203ENST00000398339 R3HCC1Q9Y3T6 440 aaKnown RBP10.14□□□□□ -0.79
TCF4-203ENST00000398339 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
TCF4-203ENST00000398339 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
TCF4-203ENST00000398339 PTPRMP28827 1452 aa10.13□□□□□ -0.79
TCF4-203ENST00000398339 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
TCF4-203ENST00000398339 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
TCF4-203ENST00000398339 C16orf71Q8IYS4 520 aaPredicted RBP10.13□□□□□ -0.79
TCF4-203ENST00000398339 TMEM51Q9NW97 253 aa10.13□□□□□ -0.79
TCF4-203ENST00000398339 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
TCF4-203ENST00000398339 POLKQ9UBT6 870 aa10.13□□□□□ -0.79
TCF4-203ENST00000398339 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
TCF4-203ENST00000398339 CLTCQ00610 1675 aaKnown RBP10.12□□□□□ -0.79
TCF4-203ENST00000398339 ST18O60284 1047 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 ZGPATQ8N5A5 531 aaKnown RBP10.12□□□□□ -0.79
TCF4-203ENST00000398339 MAP7D2Q96T17 732 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 ZKSCAN5Q9Y2L8 839 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 KNDC1Q76NI1 1749 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 SIGLEC1Q9BZZ2 1709 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 HMOX1P09601 288 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 MCM5P33992 734 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 XPCQ01831 940 aaPredicted RBP10.12□□□□□ -0.79
TCF4-203ENST00000398339 LRSAM1Q6UWE0 723 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 C8orf58Q8NAV2 365 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 PRAM1Q96QH2 718 aa10.12□□□□□ -0.79
TCF4-203ENST00000398339 SDSP20132 328 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 KIF20BQ96Q89 1820 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 OTUD7AQ8TE49 926 aaPredicted RBP10.11□□□□□ -0.79
TCF4-203ENST00000398339 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 ASXL2Q76L83 1435 aa10.11□□□□□ -0.79
TCF4-203ENST00000398339 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 UQCRHP07919 91 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 FBLN1P23142 703 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 YTHDC2Q9H6S0 1430 aaKnown RBP10.1□□□□□ -0.79
TCF4-203ENST00000398339 TMEM63CQ9P1W3 806 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 CDK19Q9BWU1 502 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 PRDM10Q9NQV6 1147 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 FAM13BQ9NYF5 915 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 CCDC39Q9UFE4 941 aa10.1□□□□□ -0.79
TCF4-203ENST00000398339 SYCE3A1L190 88 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 IDI1Q13907 227 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 RGS22Q8NE09 1264 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 SENP3Q9H4L4 574 aaPredicted RBP10.09□□□□□ -0.79
TCF4-203ENST00000398339 REC8O95072 547 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 IL13P35225 146 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 LMOD3Q0VAK6 560 aa10.09□□□□□ -0.79
TCF4-203ENST00000398339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.79
TCF4-203ENST00000398339 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
TCF4-203ENST00000398339 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
TCF4-203ENST00000398339 ARHGEF40Q8TER5 1519 aa10.08□□□□□ -0.8
TCF4-203ENST00000398339 MBD3O95983 291 aa10.08□□□□□ -0.8
TCF4-203ENST00000398339 CEP85Q6P2H3 762 aa10.08□□□□□ -0.8
TCF4-203ENST00000398339 CHAMP1Q96JM3 812 aa10.08□□□□□ -0.8
TCF4-203ENST00000398339 DYNC1I1O14576 645 aa10.08□□□□□ -0.8
TCF4-203ENST00000398339 RIMS2Q9UQ26 1411 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 VGLL3A8MV65 326 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 ERC2O15083 957 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 SMARCA5O60264 1052 aaPredicted RBP10.07□□□□□ -0.8
TCF4-203ENST00000398339 SASS6Q6UVJ0 657 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 RGS12O14924 1447 aa10.07□□□□□ -0.8
TCF4-203ENST00000398339 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
TCF4-203ENST00000398339 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
TCF4-203ENST00000398339 MTERF4Q7Z6M4 381 aaKnown RBP10.06□□□□□ -0.8
TCF4-203ENST00000398339 SLC52A1Q9NWF4 448 aa10.06□□□□□ -0.8
TCF4-203ENST00000398339 BRD1O95696 1058 aa10.06□□□□□ -0.8
TCF4-203ENST00000398339 TMX3Q96JJ7 454 aa10.06□□□□□ -0.8
TCF4-203ENST00000398339 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
TCF4-203ENST00000398339 ATP7BP35670 1465 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 CDK12Q9NYV4 1490 aaPredicted RBP10.05□□□□□ -0.8
TCF4-203ENST00000398339 APBB1O00213 710 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
TCF4-203ENST00000398339 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
TCF4-203ENST00000398339 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 TSPY26PQ9H489 355 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 MSH6P52701 1360 aa10.05□□□□□ -0.8
TCF4-203ENST00000398339 MCM2P49736 904 aa10.04□□□□□ -0.8
TCF4-203ENST00000398339 NEK4P51957 841 aa10.04□□□□□ -0.8
TCF4-203ENST00000398339 CUL4AQ13619 759 aa10.04□□□□□ -0.8
TCF4-203ENST00000398339 SMAP1Q8IYB5 467 aaPredicted RBP10.04□□□□□ -0.8
TCF4-203ENST00000398339 ZHX1Q9UKY1 873 aaPredicted RBP10.04□□□□□ -0.8
TCF4-203ENST00000398339 OSBPL3Q9H4L5 887 aa10.04□□□□□ -0.8
TCF4-203ENST00000398339 MAP2P11137 1827 aaKnown RBP10.03□□□□□ -0.8
TCF4-203ENST00000398339 MEIS3Q99687 375 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms