RNA–Protein interactions for RNA: ENST00000398249.8

GSK3A-202, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSK3A, Length 3,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-202ENST00000398249 LMBRD1Q9NUN5 540 aa11.38□□□□□ -0.59
GSK3A-202ENST00000398249 GSPT1P15170 499 aaKnown RBP11.38□□□□□ -0.59
GSK3A-202ENST00000398249 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 LRRC7Q96NW7 1537 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 KIF20BQ96Q89 1820 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 MYO5BQ9ULV0 1848 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 ZNF771Q7L3S4 317 aaPredicted RBP11.37□□□□□ -0.59
GSK3A-202ENST00000398249 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 CD163L1Q9NR16 1453 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 IL16Q14005 1332 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 NSD2O96028 1365 aa11.37□□□□□ -0.59
GSK3A-202ENST00000398249 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
GSK3A-202ENST00000398249 CDC42BPGQ6DT37 1551 aa11.36□□□□□ -0.59
GSK3A-202ENST00000398249 ZSCAN20P17040 1043 aaPredicted RBP11.36□□□□□ -0.59
GSK3A-202ENST00000398249 TERF1P54274 439 aa11.36□□□□□ -0.59
GSK3A-202ENST00000398249 GPT2Q8TD30 523 aa11.36□□□□□ -0.59
GSK3A-202ENST00000398249 NOL7Q9UMY1 257 aaKnown RBP11.36□□□□□ -0.59
GSK3A-202ENST00000398249 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 CLSTN1O94985 981 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 DDX49Q9Y6V7 483 aaKnown RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 TNNT3P45378 269 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 PSMD1Q99460 953 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
GSK3A-202ENST00000398249 LETM1O95202 739 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
GSK3A-202ENST00000398249 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
GSK3A-202ENST00000398249 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
GSK3A-202ENST00000398249 KIF16BQ96L93 1317 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 ALDH1L2Q3SY69 923 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 AXDND1Q5T1B0 1012 aaPredicted RBP11.34□□□□□ -0.59
GSK3A-202ENST00000398249 CYB5RLQ6IPT4 315 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
GSK3A-202ENST00000398249 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
GSK3A-202ENST00000398249 MCTP1Q6DN14 999 aa11.34□□□□□ -0.59
GSK3A-202ENST00000398249 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.59
GSK3A-202ENST00000398249 TAF3Q5VWG9 929 aa11.33□□□□□ -0.6
GSK3A-202ENST00000398249 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
GSK3A-202ENST00000398249 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
GSK3A-202ENST00000398249 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
GSK3A-202ENST00000398249 TCHHQ07283 1943 aa11.33□□□□□ -0.6
GSK3A-202ENST00000398249 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
GSK3A-202ENST00000398249 HS1BP3Q53T59 392 aa11.33□□□□□ -0.6
GSK3A-202ENST00000398249 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.33□□□□□ -0.6
GSK3A-202ENST00000398249 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
GSK3A-202ENST00000398249 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
GSK3A-202ENST00000398249 LOC102724159A0A0B4J2E5 919 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
GSK3A-202ENST00000398249 PWP2Q15269 919 aaKnown RBP11.32□□□□□ -0.6
GSK3A-202ENST00000398249 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 TSPOAP1O95153 1857 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 MLECQ14165 292 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
GSK3A-202ENST00000398249 TSPYL6Q8N831 410 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 TMEM132AQ24JP5 1023 aa11.32□□□□□ -0.6
GSK3A-202ENST00000398249 TNNT1P13805 278 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 PLEKHM2Q8IWE5 1019 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
GSK3A-202ENST00000398249 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
GSK3A-202ENST00000398249 GGNBP2Q9H3C7 697 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 VAMP4O75379 141 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
GSK3A-202ENST00000398249 PSEN1P49768 467 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 IDI1Q13907 227 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 ABCC4O15439 1325 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 UQCRHLA0A096LP55 91 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 UQCRHP07919 91 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
GSK3A-202ENST00000398249 ZBTB12Q9Y330 459 aaPredicted RBP11.3□□□□□ -0.6
GSK3A-202ENST00000398249 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
GSK3A-202ENST00000398249 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
GSK3A-202ENST00000398249 FYB1O15117 783 aa11.3□□□□□ -0.6
GSK3A-202ENST00000398249 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
GSK3A-202ENST00000398249 CDC45O75419 566 aa11.29□□□□□ -0.6
GSK3A-202ENST00000398249 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
GSK3A-202ENST00000398249 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
GSK3A-202ENST00000398249 ZKSCAN5Q9Y2L8 839 aa11.29□□□□□ -0.6
GSK3A-202ENST00000398249 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
GSK3A-202ENST00000398249 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
GSK3A-202ENST00000398249 PTPRMP28827 1452 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms