RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 BTG4Q9NY30 223 aa25.12■■□□□ 1.61
PDLIM2-204ENST00000397760 TOM1L2Q6ZVM7 507 aa25.11■■□□□ 1.61
PDLIM2-204ENST00000397760 THUMPD2Q9BTF0 503 aaKnown RBP25.1■■□□□ 1.61
PDLIM2-204ENST00000397760 CALD1Q05682 793 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-204ENST00000397760 PLEKHO1Q53GL0 409 aaPredicted RBP25.09■■□□□ 1.61
PDLIM2-204ENST00000397760 RAPGEF4Q8WZA2 1011 aa25.09■■□□□ 1.61
PDLIM2-204ENST00000397760 MYH16Q9H6N6 1097 aa25.09■■□□□ 1.61
PDLIM2-204ENST00000397760 DCTN1Q14203 1278 aa25.09■■□□□ 1.61
PDLIM2-204ENST00000397760 AMOTQ4VCS5 1084 aa25.08■■□□□ 1.61
PDLIM2-204ENST00000397760 HSPA1LP34931 641 aa25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 LARP1Q6PKG0 1096 aaKnown RBP25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 RTF1Q92541 710 aaKnown RBP25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 MCM10Q7L590 875 aa25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 COL14A1Q05707 1796 aaKnown RBP25.07■■□□□ 1.6
PDLIM2-204ENST00000397760 GNAT3A8MTJ3 354 aa25.06■■□□□ 1.6
PDLIM2-204ENST00000397760 TATP17735 454 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-204ENST00000397760 CARD10Q9BWT7 1032 aa25.06■■□□□ 1.6
PDLIM2-204ENST00000397760 HTATSF1O43719 755 aaKnown RBP25.05■■□□□ 1.6
PDLIM2-204ENST00000397760 RCAN3Q9UKA8 241 aa25.05■■□□□ 1.6
PDLIM2-204ENST00000397760 LAS1LQ9Y4W2 734 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-204ENST00000397760 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
PDLIM2-204ENST00000397760 MAP3K5Q99683 1374 aa25.04■■□□□ 1.6
PDLIM2-204ENST00000397760 ZNF530Q6P9A1 599 aaPredicted RBP25.03■■□□□ 1.6
PDLIM2-204ENST00000397760 TSR2Q969E8 191 aaKnown RBP25.02■■□□□ 1.6
PDLIM2-204ENST00000397760 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
PDLIM2-204ENST00000397760 SPATA31A6Q5VVP1 1343 aa25.02■■□□□ 1.6
PDLIM2-204ENST00000397760 MEGF6O75095 1541 aa25.01■■□□□ 1.59
PDLIM2-204ENST00000397760 GNAI1P63096 354 aa25.01■■□□□ 1.59
PDLIM2-204ENST00000397760 AKAP4Q5JQC9 854 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 B4GALNT3Q6L9W6 998 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 CRB1P82279 1406 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 ZNF853P0CG23 659 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 C1orf141Q5JVX7 400 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 CFAP44Q96MT7 982 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25■■□□□ 1.59
PDLIM2-204ENST00000397760 SPG7Q9UQ90 795 aa25■■□□□ 1.59
PDLIM2-204ENST00000397760 PLEKHG2Q9H7P9 1386 aa24.99■■□□□ 1.59
PDLIM2-204ENST00000397760 IL17REQ8NFR9 667 aa24.98■■□□□ 1.59
PDLIM2-204ENST00000397760 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
PDLIM2-204ENST00000397760 IL2RBP14784 551 aa24.96■■□□□ 1.59
PDLIM2-204ENST00000397760 MBIPQ9NS73 344 aa24.96■■□□□ 1.59
PDLIM2-204ENST00000397760 EXOSC9Q06265 439 aaKnown RBP24.95■■□□□ 1.58
PDLIM2-204ENST00000397760 OVOS2A0A0G2JMS6 1433 aa24.95■■□□□ 1.58
PDLIM2-204ENST00000397760 C8orf37Q96NL8 207 aa24.94■■□□□ 1.58
PDLIM2-204ENST00000397760 CHL1O00533 1208 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 NGLY1Q96IV0 654 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 LGR6Q9HBX8 967 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 PLCH1Q4KWH8 1693 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 SLIT2O94813 1529 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 MPRIPQ6WCQ1 1025 aa24.93■■□□□ 1.58
PDLIM2-204ENST00000397760 CEMIPQ8WUJ3 1361 aa24.92■■□□□ 1.58
PDLIM2-204ENST00000397760 PHKG2P15735 406 aa24.91■■□□□ 1.58
PDLIM2-204ENST00000397760 IFNL2Q8IZJ0 200 aa24.91■■□□□ 1.58
PDLIM2-204ENST00000397760 ZCRB1Q8TBF4 217 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-204ENST00000397760 LRP6O75581 1613 aa24.91■■□□□ 1.58
PDLIM2-204ENST00000397760 RNMTO43148 476 aaKnown RBP24.91■■□□□ 1.58
PDLIM2-204ENST00000397760 CT47B1P0C2W7 299 aaPredicted RBP24.9■■□□□ 1.58
PDLIM2-204ENST00000397760 CCDC136Q96JN2 1154 aa24.9■■□□□ 1.58
PDLIM2-204ENST00000397760 CYP27B1O15528 508 aa24.89■■□□□ 1.58
PDLIM2-204ENST00000397760 TAF7Q15545 349 aaPredicted RBP24.89■■□□□ 1.58
PDLIM2-204ENST00000397760 UNC5CLQ8IV45 518 aa24.89■■□□□ 1.57
PDLIM2-204ENST00000397760 MIS18AQ9NYP9 233 aa24.89■■□□□ 1.57
PDLIM2-204ENST00000397760 TSPYL4Q9UJ04 414 aa24.89■■□□□ 1.57
PDLIM2-204ENST00000397760 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
PDLIM2-204ENST00000397760 MEX3CQ5U5Q3 659 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-204ENST00000397760 FNBP4Q8N3X1 1017 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-204ENST00000397760 SPATA31A1Q5TZJ5 1347 aa24.87■■□□□ 1.57
PDLIM2-204ENST00000397760 PCDH11XQ9BZA7 1347 aa24.87■■□□□ 1.57
PDLIM2-204ENST00000397760 PCDH11YQ9BZA8 1340 aa24.87■■□□□ 1.57
PDLIM2-204ENST00000397760 TEFQ10587 303 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 NWD2Q9ULI1 1742 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 RARSP54136 660 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 BABAM1Q9NWV8 329 aa24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 CCDC9Q9Y3X0 531 aaKnown RBP24.86■■□□□ 1.57
PDLIM2-204ENST00000397760 HSP90AB1P08238 724 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-204ENST00000397760 THRAP3Q9Y2W1 955 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-204ENST00000397760 SPATA31A5Q5VU36 1347 aa24.85■■□□□ 1.57
PDLIM2-204ENST00000397760 SPATA31A7Q8IWB4 1347 aa24.85■■□□□ 1.57
PDLIM2-204ENST00000397760 BCAR3O75815 825 aa24.84■■□□□ 1.57
PDLIM2-204ENST00000397760 DISP2A7MBM2 1401 aa24.84■■□□□ 1.57
PDLIM2-204ENST00000397760 DCAF5Q96JK2 942 aa24.84■■□□□ 1.57
PDLIM2-204ENST00000397760 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.57
PDLIM2-204ENST00000397760 MSH5O43196 834 aa24.83■■□□□ 1.57
PDLIM2-204ENST00000397760 TSPYL6Q8N831 410 aa24.83■■□□□ 1.57
PDLIM2-204ENST00000397760 C8orf58Q8NAV2 365 aa24.83■■□□□ 1.57
PDLIM2-204ENST00000397760 DDX54Q8TDD1 881 aaKnown RBP24.83■■□□□ 1.57
PDLIM2-204ENST00000397760 ELL2O00472 640 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-204ENST00000397760 KDM6AO15550 1401 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-204ENST00000397760 VPS72Q15906 364 aa24.82■■□□□ 1.56
PDLIM2-204ENST00000397760 CDCA7Q9BWT1 371 aaPredicted RBP24.82■■□□□ 1.56
PDLIM2-204ENST00000397760 USP21Q9UK80 565 aa24.82■■□□□ 1.56
PDLIM2-204ENST00000397760 PLIN1O60240 522 aa24.81■■□□□ 1.56
PDLIM2-204ENST00000397760 VAMP4O75379 141 aa24.81■■□□□ 1.56
PDLIM2-204ENST00000397760 TWISTNBQ3B726 338 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-204ENST00000397760 KRT24Q2M2I5 525 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms