RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 STK31Q9BXU1 1019 aa7.38□□□□□ -1.23
PTPRD-206ENST00000397617 ERBB3P21860 1342 aa7.38□□□□□ -1.23
PTPRD-206ENST00000397617 PPM1GO15355 546 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-206ENST00000397617 SOS2Q07890 1332 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-206ENST00000397617 MRC1P22897 1456 aa7.38□□□□□ -1.23
PTPRD-206ENST00000397617 TRIM27P14373 513 aa7.38□□□□□ -1.23
PTPRD-206ENST00000397617 EXOC6Q8TAG9 804 aa7.38□□□□□ -1.23
PTPRD-206ENST00000397617 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
PTPRD-206ENST00000397617 EMILIN1Q9Y6C2 1016 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 TMED8Q6PL24 325 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-206ENST00000397617 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-206ENST00000397617 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 ISY1Q9ULR0 285 aaKnown RBP7.37□□□□□ -1.23
PTPRD-206ENST00000397617 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-206ENST00000397617 FBXO3Q9UK99 471 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 ATF3P18847 181 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 CCDC30Q5VVM6 783 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 TMEM94Q12767 1356 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 AKAP4Q5JQC9 854 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 B4GALNT3Q6L9W6 998 aa7.37□□□□□ -1.23
PTPRD-206ENST00000397617 ALDH1L1O75891 902 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 SULT6B1Q6IMI4 303 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 PROSER2Q86WR7 435 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 GNAT3A8MTJ3 354 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 EXOSC9Q06265 439 aaKnown RBP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 CRBNQ96SW2 442 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 GCP02774 474 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 PDE4AP27815 886 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 HOXC9P31274 260 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 ABTB2Q8N961 1025 aa7.36□□□□□ -1.23
PTPRD-206ENST00000397617 SPINK5Q9NQ38 1064 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-206ENST00000397617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.23
PTPRD-206ENST00000397617 ZBTB22O15209 634 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 BECN1Q14457 450 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 ANKRD44Q8N8A2 993 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 DCTPP1Q9H773 170 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 IL17RAQ96F46 866 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 LTN1O94822 1766 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 CIZ1Q9ULV3 898 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-206ENST00000397617 RGPD8O14715 1765 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-206ENST00000397617 EYA1Q99502 592 aa7.35□□□□□ -1.23
PTPRD-206ENST00000397617 SPATA31A3Q5VYP0 1347 aa7.34□□□□□ -1.23
PTPRD-206ENST00000397617 PHACTR3Q96KR7 559 aa7.34□□□□□ -1.23
PTPRD-206ENST00000397617 MRPL50Q8N5N7 158 aaKnown RBP7.34□□□□□ -1.23
PTPRD-206ENST00000397617 AEBP2Q6ZN18 517 aaPredicted RBP7.34□□□□□ -1.23
PTPRD-206ENST00000397617 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
PTPRD-206ENST00000397617 PEAK1Q9H792 1746 aa7.34□□□□□ -1.23
PTPRD-206ENST00000397617 MBIPQ9NS73 344 aa7.34□□□□□ -1.23
PTPRD-206ENST00000397617 DBF4Q9UBU7 674 aaPredicted RBP7.34□□□□□ -1.24
PTPRD-206ENST00000397617 PTMSP20962 102 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 PXDNQ92626 1479 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 NKX1-1Q15270 411 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-206ENST00000397617 NUTM2DQ5VT03 806 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-206ENST00000397617 VSIG10Q8N0Z9 540 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 TEX13AQ9BXU3 409 aaPredicted RBP7.33□□□□□ -1.24
PTPRD-206ENST00000397617 CCDC146Q8IYE0 955 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 PKD1L3Q7Z443 1732 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 RFX7Q2KHR2 1363 aa7.33□□□□□ -1.24
PTPRD-206ENST00000397617 NT5C2P49902 561 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 ZBTB47Q9UFB7 747 aaPredicted RBP7.32□□□□□ -1.24
PTPRD-206ENST00000397617 KDM3BQ7LBC6 1761 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 LRP6O75581 1613 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 ZBTB7BO15156 539 aaPredicted RBP7.32□□□□□ -1.24
PTPRD-206ENST00000397617 TEFQ10587 303 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 COL18A1P39060 1754 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 DDX58O95786 925 aaKnown RBP7.32□□□□□ -1.24
PTPRD-206ENST00000397617 TRIM28Q13263 835 aaKnown RBP7.32□□□□□ -1.24
PTPRD-206ENST00000397617 MCM2P49736 904 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 CHMP4CQ96CF2 233 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 SCN11AQ9UI33 1791 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 RAB11FIP3O75154 756 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 HYPKQ9NX55 129 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 SPG7Q9UQ90 795 aa7.32□□□□□ -1.24
PTPRD-206ENST00000397617 HSP90B1P14625 803 aaKnown RBP7.31□□□□□ -1.24
PTPRD-206ENST00000397617 CICQ96RK0 1608 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-206ENST00000397617 SIPA1L3O60292 1781 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-206ENST00000397617 ANAPC15P60006 121 aa7.31□□□□□ -1.24
PTPRD-206ENST00000397617 RAPGEF4Q8WZA2 1011 aa7.31□□□□□ -1.24
PTPRD-206ENST00000397617 AHDC1Q5TGY3 1603 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-206ENST00000397617 NUCB1Q02818 461 aa7.31□□□□□ -1.24
PTPRD-206ENST00000397617 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
PTPRD-206ENST00000397617 REC8O95072 547 aa7.31□□□□□ -1.24
PTPRD-206ENST00000397617 RBM25P49756 843 aaKnown RBP7.31□□□□□ -1.24
PTPRD-206ENST00000397617 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 COG6Q9Y2V7 657 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 CRYBG1Q9Y4K1 1723 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 NOP58Q9Y2X3 529 aaKnown RBP7.3□□□□□ -1.24
PTPRD-206ENST00000397617 WDR17Q8IZU2 1322 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 BCAR3O75815 825 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 JCADQ9P266 1359 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 ERVV-2B6SEH9 535 aa7.3□□□□□ -1.24
PTPRD-206ENST00000397617 TNNT2P45379 298 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-206ENST00000397617 ERC1Q8IUD2 1116 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms