RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 DYNC1I1O14576 645 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 UQCRHP07919 91 aa6.2□□□□□ -1.42
SSR1-202ENST00000397511 REREQ9P2R6 1566 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 ALKQ9UM73 1620 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 ZBTB7CA1YPR0 619 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 F6X3S4 739 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 GNAI1P63096 354 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 TSHZ3Q63HK5 1081 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 DIP2BQ9P265 1576 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 RICTORQ6R327 1708 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 IGSF3O75054 1194 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 KIF20AO95235 890 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 CT47B1P0C2W7 299 aaPredicted RBP6.19□□□□□ -1.42
SSR1-202ENST00000397511 PPP4R3BQ5MIZ7 849 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 TBC1D9Q6ZT07 1266 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 LTV1Q96GA3 475 aaPredicted RBP6.19□□□□□ -1.42
SSR1-202ENST00000397511 PUS7Q96PZ0 661 aaKnown RBP6.19□□□□□ -1.42
SSR1-202ENST00000397511 PPP1R9BQ96SB3 815 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 CHMP4BQ9H444 224 aaKnown RBP6.19□□□□□ -1.42
SSR1-202ENST00000397511 CCDC61Q9Y6R9 512 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 VIRMAQ69YN4 1812 aaKnown RBP6.19□□□□□ -1.42
SSR1-202ENST00000397511 TMEM131LA2VDJ0 1609 aa6.19□□□□□ -1.42
SSR1-202ENST00000397511 PTMSP20962 102 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 ARID3AQ99856 593 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 CCDC94Q9BW85 323 aaPredicted RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 PREX1Q8TCU6 1659 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 ADGRB2O60241 1585 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 RIMS2Q9UQ26 1411 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 CDK11BP21127 795 aaKnown RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 SKOR2Q2VWA4 1001 aaPredicted RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 ALDH1L2Q3SY69 923 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 ARHGEF40Q8TER5 1519 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 SLC4A2P04920 1241 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 EIF4A2Q14240 407 aaKnown RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 CSPP1Q1MSJ5 1256 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 FOXD4L5Q5VV16 416 aaPredicted RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 FOXD4L4Q8WXT5 416 aaPredicted RBP6.18□□□□□ -1.42
SSR1-202ENST00000397511 CFAP44Q96MT7 982 aa6.18□□□□□ -1.42
SSR1-202ENST00000397511 IL16Q14005 1332 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 PNPLA6Q8IY17 1366 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 LETM1O95202 739 aaPredicted RBP6.17□□□□□ -1.42
SSR1-202ENST00000397511 NOL8Q76FK4 1167 aaKnown RBP6.17□□□□□ -1.42
SSR1-202ENST00000397511 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 USP32Q8NFA0 1604 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 FAM135BQ49AJ0 1406 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
SSR1-202ENST00000397511 NASPP49321 788 aaPredicted RBP6.17□□□□□ -1.42
SSR1-202ENST00000397511 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 MEIS3Q99687 375 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 ACEP12821 1306 aa6.17□□□□□ -1.42
SSR1-202ENST00000397511 GSPT1P15170 499 aaKnown RBP6.16□□□□□ -1.42
SSR1-202ENST00000397511 C1QBPQ07021 282 aaKnown RBP6.16□□□□□ -1.42
SSR1-202ENST00000397511 TAF3Q5VWG9 929 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 TNPO1Q92973 898 aaKnown RBP6.16□□□□□ -1.42
SSR1-202ENST00000397511 CHAMP1Q96JM3 812 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 ARHGAP31Q2M1Z3 1444 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 G2E3Q7L622 706 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 GAS2L3Q86XJ1 694 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 GBP4Q96PP9 640 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 AK9Q5TCS8 1911 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 CPS1P31327 1500 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 ZNF500O60304 480 aaPredicted RBP6.16□□□□□ -1.42
SSR1-202ENST00000397511 KIF2CQ99661 725 aa6.16□□□□□ -1.42
SSR1-202ENST00000397511 A2ML1A8K2U0 1454 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 CLTCQ00610 1675 aaKnown RBP6.15□□□□□ -1.42
SSR1-202ENST00000397511 FOXD4L6Q3SYB3 417 aaPredicted RBP6.15□□□□□ -1.42
SSR1-202ENST00000397511 BMP2KLQ5H9B9 411 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 SASS6Q6UVJ0 657 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 FOXD4L3Q6VB84 417 aaPredicted RBP6.15□□□□□ -1.42
SSR1-202ENST00000397511 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
SSR1-202ENST00000397511 NGDNQ8NEJ9 315 aaKnown RBP6.15□□□□□ -1.42
SSR1-202ENST00000397511 GCC1Q96CN9 775 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 EXOC6BQ9Y2D4 811 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 ZFYVE9O95405 1425 aa6.15□□□□□ -1.42
SSR1-202ENST00000397511 SSFA2P28290 1259 aa6.15□□□□□ -1.43
SSR1-202ENST00000397511 LTKP29376 864 aa6.15□□□□□ -1.43
SSR1-202ENST00000397511 PLEKHM2Q8IWE5 1019 aa6.15□□□□□ -1.43
SSR1-202ENST00000397511 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.43
SSR1-202ENST00000397511 GAS2L2Q8NHY3 880 aa6.15□□□□□ -1.43
SSR1-202ENST00000397511 AGLP35573 1532 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 ZMYM3Q14202 1370 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 ROBO2Q9HCK4 1378 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 DTNBO60941 627 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 AMPHP49418 695 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 PKP1Q13835 747 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 RTF1Q92541 710 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 TSPYL4Q9UJ04 414 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 MSH6P52701 1360 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 TTC21BQ7Z4L5 1316 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 KIF13AQ9H1H9 1805 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 API5Q9BZZ5 524 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 TMEM51Q9NW97 253 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 NOL7Q9UMY1 257 aaKnown RBP6.14□□□□□ -1.43
SSR1-202ENST00000397511 KIF20BQ96Q89 1820 aa6.14□□□□□ -1.43
SSR1-202ENST00000397511 ABCC4O15439 1325 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 386 ms