RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
MCF2L-208ENST00000397030 FAM177A1Q8N128 213 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-208ENST00000397030 AXDND1Q5T1B0 1012 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-208ENST00000397030 GPTP24298 496 aa20.55■□□□□ 0.88
MCF2L-208ENST00000397030 GSE1Q14687 1217 aa20.55■□□□□ 0.88
MCF2L-208ENST00000397030 JMYQ8N9B5 988 aa20.55■□□□□ 0.88
MCF2L-208ENST00000397030 CUL5Q93034 780 aa20.55■□□□□ 0.88
MCF2L-208ENST00000397030 DNAI2Q9GZS0 605 aa20.54■□□□□ 0.88
MCF2L-208ENST00000397030 TRMT112Q9UI30 125 aaKnown RBP20.54■□□□□ 0.88
MCF2L-208ENST00000397030 NFKBIBQ15653 356 aa20.54■□□□□ 0.88
MCF2L-208ENST00000397030 CAVIN1Q6NZI2 390 aaKnown RBP20.54■□□□□ 0.88
MCF2L-208ENST00000397030 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
MCF2L-208ENST00000397030 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
MCF2L-208ENST00000397030 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 CEP57L1Q8IYX8 460 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 RFC4P35249 363 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 ANAPC15P60006 121 aa20.53■□□□□ 0.88
MCF2L-208ENST00000397030 H0YHG0 523 aa20.52■□□□□ 0.88
MCF2L-208ENST00000397030 HMGB2P26583 209 aaKnown RBP20.52■□□□□ 0.88
MCF2L-208ENST00000397030 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
MCF2L-208ENST00000397030 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.88
MCF2L-208ENST00000397030 EXOC5O00471 708 aa20.52■□□□□ 0.88
MCF2L-208ENST00000397030 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
MCF2L-208ENST00000397030 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.87
MCF2L-208ENST00000397030 ZNF444Q8N0Y2 327 aaPredicted RBP20.52■□□□□ 0.87
MCF2L-208ENST00000397030 UBAP1LF5GYI3 381 aa20.51■□□□□ 0.87
MCF2L-208ENST00000397030 CALRP27797 417 aaKnown RBP20.51■□□□□ 0.87
MCF2L-208ENST00000397030 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
MCF2L-208ENST00000397030 SYNJ2O15056 1496 aa20.51■□□□□ 0.87
MCF2L-208ENST00000397030 RANBP6O60518 1105 aaKnown RBP20.51■□□□□ 0.87
MCF2L-208ENST00000397030 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
MCF2L-208ENST00000397030 ERCC4Q92889 916 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-208ENST00000397030 DACH1Q9UI36 760 aa20.51■□□□□ 0.87
MCF2L-208ENST00000397030 POTEJP0CG39 1038 aa20.51■□□□□ 0.87
MCF2L-208ENST00000397030 CDKL5O76039 1030 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 LUC7LQ9NQ29 371 aaKnown RBP20.5■□□□□ 0.87
MCF2L-208ENST00000397030 FAM193AP78312 1265 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 IMMTQ16891 758 aaKnown RBP20.5■□□□□ 0.87
MCF2L-208ENST00000397030 PDCP20941 246 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-208ENST00000397030 WAPLQ7Z5K2 1190 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 CCDC82Q8N4S0 544 aa20.5■□□□□ 0.87
MCF2L-208ENST00000397030 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
MCF2L-208ENST00000397030 DDX11Q96FC9 970 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 TSPY26PQ9H489 355 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 FOXO3O43524 673 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 ERBINQ96RT1 1412 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 C8orf37Q96NL8 207 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
MCF2L-208ENST00000397030 GOLGA6L10A6NI86 522 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 PDRG1Q9NUG6 133 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 ANKRD1Q15327 319 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
MCF2L-208ENST00000397030 TSPYL1Q9H0U9 437 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 KCNH5Q8NCM2 988 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 COMMD10Q9Y6G5 202 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 MCM10Q7L590 875 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 CTNNA3Q9UI47 895 aa20.48■□□□□ 0.87
MCF2L-208ENST00000397030 MPNDQ8N594 471 aa20.47■□□□□ 0.87
MCF2L-208ENST00000397030 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
MCF2L-208ENST00000397030 TNMDQ9H2S6 317 aa20.47■□□□□ 0.87
MCF2L-208ENST00000397030 ST5P78524 1137 aa20.47■□□□□ 0.87
MCF2L-208ENST00000397030 MYO1BO43795 1136 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 CCDC150Q8NCX0 1101 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-208ENST00000397030 SLC5A1P13866 664 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
MCF2L-208ENST00000397030 LETM1O95202 739 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-208ENST00000397030 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-208ENST00000397030 MAP3K9P80192 1104 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
MCF2L-208ENST00000397030 CCDC112Q8NEF3 446 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 CUX1P39880 1505 aa20.46■□□□□ 0.87
MCF2L-208ENST00000397030 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
MCF2L-208ENST00000397030 BLOC1S2Q6QNY1 142 aa20.45■□□□□ 0.86
MCF2L-208ENST00000397030 SAMM50Q9Y512 469 aa20.45■□□□□ 0.86
MCF2L-208ENST00000397030 CCDC39Q9UFE4 941 aa20.44■□□□□ 0.86
MCF2L-208ENST00000397030 AKAP2Q9Y2D5 859 aa20.44■□□□□ 0.86
MCF2L-208ENST00000397030 PPP1R12BO60237 982 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-208ENST00000397030 IFIT5Q13325 482 aaKnown RBP20.44■□□□□ 0.86
MCF2L-208ENST00000397030 FERMT2Q96AC1 680 aa20.44■□□□□ 0.86
MCF2L-208ENST00000397030 BIN2Q9UBW5 565 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-208ENST00000397030 TNNT1P13805 278 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 NASPP49321 788 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-208ENST00000397030 NAPBQ9H115 298 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 TAF3Q5VWG9 929 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 CCDC7Q96M83 1385 aa20.43■□□□□ 0.86
MCF2L-208ENST00000397030 EZRP15311 586 aaKnown RBP20.43■□□□□ 0.86
MCF2L-208ENST00000397030 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
MCF2L-208ENST00000397030 WASF1Q92558 559 aa20.42■□□□□ 0.86
MCF2L-208ENST00000397030 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms