RNA–Protein interactions for RNA: ENST00000396680.2

ATF4-202, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-202ENST00000396680 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
ATF4-202ENST00000396680 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
ATF4-202ENST00000396680 RALBP1Q15311 655 aa18.89■□□□□ 0.61
ATF4-202ENST00000396680 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
ATF4-202ENST00000396680 RGPD1P0DJD0 1748 aa18.89■□□□□ 0.61
ATF4-202ENST00000396680 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
ATF4-202ENST00000396680 PCDH11XQ9BZA7 1347 aa18.88■□□□□ 0.61
ATF4-202ENST00000396680 PCDH11YQ9BZA8 1340 aa18.88■□□□□ 0.61
ATF4-202ENST00000396680 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
ATF4-202ENST00000396680 HMOX1P09601 288 aa18.87■□□□□ 0.61
ATF4-202ENST00000396680 BAG6P46379 1132 aa18.87■□□□□ 0.61
ATF4-202ENST00000396680 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
ATF4-202ENST00000396680 ACSBG1Q96GR2 724 aa18.87■□□□□ 0.61
ATF4-202ENST00000396680 APBA3O96018 575 aa18.86■□□□□ 0.61
ATF4-202ENST00000396680 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
ATF4-202ENST00000396680 BCL9O00512 1426 aa18.85■□□□□ 0.61
ATF4-202ENST00000396680 TNS1Q9HBL0 1735 aaKnown RBP18.85■□□□□ 0.61
ATF4-202ENST00000396680 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
ATF4-202ENST00000396680 PKD1L3Q7Z443 1732 aa18.84■□□□□ 0.61
ATF4-202ENST00000396680 KDRP35968 1356 aa18.83■□□□□ 0.61
ATF4-202ENST00000396680 MYBBP1AQ9BQG0 1328 aaKnown RBP18.83■□□□□ 0.6
ATF4-202ENST00000396680 CYP27B1O15528 508 aa18.83■□□□□ 0.6
ATF4-202ENST00000396680 KCNQ2O43526 872 aa18.83■□□□□ 0.6
ATF4-202ENST00000396680 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
ATF4-202ENST00000396680 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.6
ATF4-202ENST00000396680 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
ATF4-202ENST00000396680 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.6
ATF4-202ENST00000396680 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
ATF4-202ENST00000396680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■□□□□ 9.1
ATF4-202ENST00000396680 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
ATF4-202ENST00000396680 SBF2Q86WG5 1849 aa18.82■□□□□ 0.6
ATF4-202ENST00000396680 NHSQ6T4R5 1651 aa18.8■□□□□ 0.6
ATF4-202ENST00000396680 DOT1LQ8TEK3 1739 aa18.8■□□□□ 0.6
ATF4-202ENST00000396680 PLEKHG2Q9H7P9 1386 aa18.8■□□□□ 0.6
ATF4-202ENST00000396680 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
ATF4-202ENST00000396680 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATF4-202ENST00000396680 AMOTQ4VCS5 1084 aa18.8■□□□□ 0.6
ATF4-202ENST00000396680 ZNF530Q6P9A1 599 aaPredicted RBP18.8■□□□□ 0.6
ATF4-202ENST00000396680 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
ATF4-202ENST00000396680 PHKG2P15735 406 aa18.79■□□□□ 0.6
ATF4-202ENST00000396680 EZH2Q15910 746 aaKnown RBP18.79■□□□□ 0.6
ATF4-202ENST00000396680 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
ATF4-202ENST00000396680 C1orf141Q5JVX7 400 aa18.77■□□□□ 0.6
ATF4-202ENST00000396680 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
ATF4-202ENST00000396680 ANP32CO43423 234 aa18.74■□□□□ 0.59
ATF4-202ENST00000396680 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
ATF4-202ENST00000396680 NKX1-1Q15270 411 aaPredicted RBP18.74■□□□□ 0.59
ATF4-202ENST00000396680 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
ATF4-202ENST00000396680 MPRIPQ6WCQ1 1025 aa18.74■□□□□ 0.59
ATF4-202ENST00000396680 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
ATF4-202ENST00000396680 PLSCR1O15162 318 aa18.73■□□□□ 0.59
ATF4-202ENST00000396680 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
ATF4-202ENST00000396680 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
ATF4-202ENST00000396680 BTAF1O14981 1849 aa18.72■□□□□ 0.59
ATF4-202ENST00000396680 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
ATF4-202ENST00000396680 FCHSD2O94868 740 aa18.71■□□□□ 0.59
ATF4-202ENST00000396680 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
ATF4-202ENST00000396680 NEFMP07197 916 aa18.7■□□□□ 0.58
ATF4-202ENST00000396680 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
ATF4-202ENST00000396680 KAT6BQ8WYB5 2073 aa18.7■□□□□ 0.58
ATF4-202ENST00000396680 KDM6AO15550 1401 aaPredicted RBP18.69■□□□□ 0.58
ATF4-202ENST00000396680 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
ATF4-202ENST00000396680 RGPD3A6NKT7 1758 aaPredicted RBP18.68■□□□□ 0.58
ATF4-202ENST00000396680 RGPD4Q7Z3J3 1758 aa18.68■□□□□ 0.58
ATF4-202ENST00000396680 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.583e-6■□□□□ 9.5
ATF4-202ENST00000396680 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
ATF4-202ENST00000396680 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
ATF4-202ENST00000396680 RREB1Q92766 1687 aa18.68■□□□□ 0.58
ATF4-202ENST00000396680 PIGBQ92521 554 aa18.67■□□□□ 0.58
ATF4-202ENST00000396680 ERVV-2B6SEH9 535 aa18.66■□□□□ 0.58
ATF4-202ENST00000396680 CABP4P57796 275 aa18.66■□□□□ 0.58
ATF4-202ENST00000396680 ITGB4P16144 1822 aa18.66■□□□□ 0.58
ATF4-202ENST00000396680 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
ATF4-202ENST00000396680 PROM2Q8N271 834 aa18.66■□□□□ 0.58
ATF4-202ENST00000396680 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
ATF4-202ENST00000396680 MAP3K5Q99683 1374 aa18.65■□□□□ 0.58
ATF4-202ENST00000396680 MAPK8IP3Q9UPT6 1336 aa18.65■□□□□ 0.58
ATF4-202ENST00000396680 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
ATF4-202ENST00000396680 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
ATF4-202ENST00000396680 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
ATF4-202ENST00000396680 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
ATF4-202ENST00000396680 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
ATF4-202ENST00000396680 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
ATF4-202ENST00000396680 PSDA5PKW4 1024 aaPredicted RBP18.62■□□□□ 0.57
ATF4-202ENST00000396680 KCNQ4P56696 695 aa18.62■□□□□ 0.57
ATF4-202ENST00000396680 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
ATF4-202ENST00000396680 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
ATF4-202ENST00000396680 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
ATF4-202ENST00000396680 R3HDM1Q15032 1099 aaKnown RBP18.61■□□□□ 0.57
ATF4-202ENST00000396680 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
ATF4-202ENST00000396680 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
ATF4-202ENST00000396680 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
ATF4-202ENST00000396680 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
ATF4-202ENST00000396680 SCN11AQ9UI33 1791 aa18.61■□□□□ 0.57
ATF4-202ENST00000396680 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
ATF4-202ENST00000396680 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
ATF4-202ENST00000396680 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
ATF4-202ENST00000396680 LRRC4BQ9NT99 713 aa18.6■□□□□ 0.57
ATF4-202ENST00000396680 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
ATF4-202ENST00000396680 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms