RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 EZH2Q15910 746 aaKnown RBP15.19■□□□□ 0.02
NDUFA9-202ENST00000396655 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
NDUFA9-202ENST00000396655 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
NDUFA9-202ENST00000396655 PER1O15534 1290 aaPredicted RBP15.18■□□□□ 0.02
NDUFA9-202ENST00000396655 ZCRB1Q8TBF4 217 aaKnown RBP15.18■□□□□ 0.02
NDUFA9-202ENST00000396655 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
NDUFA9-202ENST00000396655 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
NDUFA9-202ENST00000396655 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
NDUFA9-202ENST00000396655 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
NDUFA9-202ENST00000396655 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
NDUFA9-202ENST00000396655 PPM1GO15355 546 aaPredicted RBP15.16■□□□□ 0.02
NDUFA9-202ENST00000396655 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
NDUFA9-202ENST00000396655 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
NDUFA9-202ENST00000396655 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
NDUFA9-202ENST00000396655 R3HDM1Q15032 1099 aaKnown RBP15.15■□□□□ 0.02
NDUFA9-202ENST00000396655 NBPF14Q5TI25 921 aa15.15■□□□□ 0.02
NDUFA9-202ENST00000396655 NPC1L1Q9UHC9 1359 aa15.14■□□□□ 0.01
NDUFA9-202ENST00000396655 RREB1Q92766 1687 aa15.14■□□□□ 0.01
NDUFA9-202ENST00000396655 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
NDUFA9-202ENST00000396655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.01
NDUFA9-202ENST00000396655 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
NDUFA9-202ENST00000396655 MEGF6O75095 1541 aa15.13■□□□□ 0.01
NDUFA9-202ENST00000396655 NHSQ6T4R5 1651 aa15.13■□□□□ 0.01
NDUFA9-202ENST00000396655 YY1P25490 414 aa15.13■□□□□ 0.01
NDUFA9-202ENST00000396655 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
NDUFA9-202ENST00000396655 KCNQ2O43526 872 aa15.12■□□□□ 0.01
NDUFA9-202ENST00000396655 PTF1AQ7RTS3 328 aa15.12■□□□□ 0.01
NDUFA9-202ENST00000396655 EYA1Q99502 592 aa15.12■□□□□ 0.01
NDUFA9-202ENST00000396655 EIF4A2Q14240 407 aaKnown RBP15.11■□□□□ 0.01
NDUFA9-202ENST00000396655 PROM2Q8N271 834 aa15.11■□□□□ 0.01
NDUFA9-202ENST00000396655 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
NDUFA9-202ENST00000396655 PCDH11XQ9BZA7 1347 aa15.11■□□□□ 0.01
NDUFA9-202ENST00000396655 PCDH11YQ9BZA8 1340 aa15.11■□□□□ 0.01
NDUFA9-202ENST00000396655 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 ZBTB22O15209 634 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 TXNRD1Q16881 649 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 ACSBG1Q96GR2 724 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 SPG7Q9UQ90 795 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
NDUFA9-202ENST00000396655 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
NDUFA9-202ENST00000396655 NKX1-1Q15270 411 aaPredicted RBP15.08■□□□□ 0
NDUFA9-202ENST00000396655 UTRNP46939 3433 aa15.07■□□□□ 0
NDUFA9-202ENST00000396655 PRIM1P49642 420 aaKnown RBP15.07■□□□□ 0
NDUFA9-202ENST00000396655 SLC27A3Q5K4L6 730 aa15.07■□□□□ 0
NDUFA9-202ENST00000396655 PKD1L3Q7Z443 1732 aa15.06■□□□□ 0
NDUFA9-202ENST00000396655 BTAF1O14981 1849 aa15.06■□□□□ 0
NDUFA9-202ENST00000396655 CYP27B1O15528 508 aa15.06■□□□□ 0
NDUFA9-202ENST00000396655 MTHFSP49914 203 aa15.04■□□□□ -0
NDUFA9-202ENST00000396655 AMOTQ4VCS5 1084 aa15.04■□□□□ -0
NDUFA9-202ENST00000396655 IFNL2Q8IZJ0 200 aa15.04■□□□□ -0
NDUFA9-202ENST00000396655 KDRP35968 1356 aa15.03■□□□□ -0
NDUFA9-202ENST00000396655 IL13P35225 146 aa15.03■□□□□ -0
NDUFA9-202ENST00000396655 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
NDUFA9-202ENST00000396655 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
NDUFA9-202ENST00000396655 SLC15A2Q16348 729 aa15.02■□□□□ -0
NDUFA9-202ENST00000396655 PLEKHO1Q53GL0 409 aaPredicted RBP15.02■□□□□ -0
NDUFA9-202ENST00000396655 STK32BQ9NY57 414 aa15.02■□□□□ -0
NDUFA9-202ENST00000396655 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
NDUFA9-202ENST00000396655 HSP90AB1P08238 724 aaKnown RBP15.01□□□□□ -0.01
NDUFA9-202ENST00000396655 PHKG2P15735 406 aa15.01□□□□□ -0.01
NDUFA9-202ENST00000396655 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
NDUFA9-202ENST00000396655 SMARCC1Q92922 1105 aaPredicted RBP15□□□□□ -0.01
NDUFA9-202ENST00000396655 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
NDUFA9-202ENST00000396655 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
NDUFA9-202ENST00000396655 SULT6B1Q6IMI4 303 aa14.99□□□□□ -0.01
NDUFA9-202ENST00000396655 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
NDUFA9-202ENST00000396655 LY75O60449 1722 aa14.98□□□□□ -0.01
NDUFA9-202ENST00000396655 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
NDUFA9-202ENST00000396655 DCAF5Q96JK2 942 aa14.98□□□□□ -0.01
NDUFA9-202ENST00000396655 SPON1Q9HCB6 807 aa14.98□□□□□ -0.01
NDUFA9-202ENST00000396655 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
NDUFA9-202ENST00000396655 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
NDUFA9-202ENST00000396655 ITGB4P16144 1822 aa14.96□□□□□ -0.01
NDUFA9-202ENST00000396655 PAPPAQ13219 1627 aa14.96□□□□□ -0.01
NDUFA9-202ENST00000396655 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.01
NDUFA9-202ENST00000396655 PIGBQ92521 554 aa14.96□□□□□ -0.01
NDUFA9-202ENST00000396655 TMOD3Q9NYL9 352 aa14.95□□□□□ -0.02
NDUFA9-202ENST00000396655 CCNL1Q9UK58 526 aaPredicted RBP14.95□□□□□ -0.02
NDUFA9-202ENST00000396655 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 C1orf141Q5JVX7 400 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 TOGARAM1Q9Y4F4 1720 aa14.94□□□□□ -0.02
NDUFA9-202ENST00000396655 QSER1Q2KHR3 1735 aa14.92□□□□□ -0.02
NDUFA9-202ENST00000396655 AKAP4Q5JQC9 854 aa14.92□□□□□ -0.02
NDUFA9-202ENST00000396655 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
NDUFA9-202ENST00000396655 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
NDUFA9-202ENST00000396655 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
NDUFA9-202ENST00000396655 ZNF827Q17R98 1081 aa14.91□□□□□ -0.02
NDUFA9-202ENST00000396655 TFCP2L1Q9NZI6 479 aa14.91□□□□□ -0.02
NDUFA9-202ENST00000396655 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
NDUFA9-202ENST00000396655 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
NDUFA9-202ENST00000396655 FLAD1Q8NFF5 587 aa14.9□□□□□ -0.02
NDUFA9-202ENST00000396655 PDGFDQ9GZP0 370 aaPredicted RBP14.9□□□□□ -0.02
NDUFA9-202ENST00000396655 LOC102724428A0A0B4J2F2 783 aa14.89□□□□□ -0.03
NDUFA9-202ENST00000396655 HMOX1P09601 288 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms