RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
PSMA1-201ENST00000396394 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
PSMA1-201ENST00000396394 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
PSMA1-201ENST00000396394 KCNQ2O43526 872 aa17.26■□□□□ 0.35
PSMA1-201ENST00000396394 R3HDM1Q15032 1099 aaKnown RBP17.26■□□□□ 0.35
PSMA1-201ENST00000396394 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
PSMA1-201ENST00000396394 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
PSMA1-201ENST00000396394 RREB1Q92766 1687 aa17.24■□□□□ 0.35
PSMA1-201ENST00000396394 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
PSMA1-201ENST00000396394 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
PSMA1-201ENST00000396394 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
PSMA1-201ENST00000396394 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
PSMA1-201ENST00000396394 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
PSMA1-201ENST00000396394 PROM2Q8N271 834 aa17.23■□□□□ 0.35
PSMA1-201ENST00000396394 MEGF6O75095 1541 aa17.23■□□□□ 0.35
PSMA1-201ENST00000396394 RGPD2P0DJD1 1756 aa17.22■□□□□ 0.35
PSMA1-201ENST00000396394 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
PSMA1-201ENST00000396394 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
PSMA1-201ENST00000396394 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
PSMA1-201ENST00000396394 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.34
PSMA1-201ENST00000396394 TXNRD1Q16881 649 aa17.21■□□□□ 0.34
PSMA1-201ENST00000396394 EYA1Q99502 592 aa17.21■□□□□ 0.34
PSMA1-201ENST00000396394 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
PSMA1-201ENST00000396394 NUP188Q5SRE5 1749 aa17.2■□□□□ 0.34
PSMA1-201ENST00000396394 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
PSMA1-201ENST00000396394 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
PSMA1-201ENST00000396394 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
PSMA1-201ENST00000396394 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
PSMA1-201ENST00000396394 EIF4A2Q14240 407 aaKnown RBP17.18■□□□□ 0.34
PSMA1-201ENST00000396394 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
PSMA1-201ENST00000396394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.343e-7■■□□□ 12.3
PSMA1-201ENST00000396394 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
PSMA1-201ENST00000396394 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
PSMA1-201ENST00000396394 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
PSMA1-201ENST00000396394 LRP5O75197 1615 aa17.15■□□□□ 0.34
PSMA1-201ENST00000396394 SHANK3Q9BYB0 1731 aa17.14■□□□□ 0.33
PSMA1-201ENST00000396394 CYP27B1O15528 508 aa17.14■□□□□ 0.33
PSMA1-201ENST00000396394 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
PSMA1-201ENST00000396394 ANO8Q9HCE9 1232 aaPredicted RBP17.14■□□□□ 0.33
PSMA1-201ENST00000396394 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
PSMA1-201ENST00000396394 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
PSMA1-201ENST00000396394 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
PSMA1-201ENST00000396394 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
PSMA1-201ENST00000396394 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
PSMA1-201ENST00000396394 BTAF1O14981 1849 aa17.13■□□□□ 0.33
PSMA1-201ENST00000396394 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
PSMA1-201ENST00000396394 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
PSMA1-201ENST00000396394 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
PSMA1-201ENST00000396394 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
PSMA1-201ENST00000396394 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
PSMA1-201ENST00000396394 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
PSMA1-201ENST00000396394 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
PSMA1-201ENST00000396394 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
PSMA1-201ENST00000396394 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
PSMA1-201ENST00000396394 IL13P35225 146 aa17.09■□□□□ 0.33
PSMA1-201ENST00000396394 MTHFSP49914 203 aa17.09■□□□□ 0.33
PSMA1-201ENST00000396394 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
PSMA1-201ENST00000396394 DOT1LQ8TEK3 1739 aa17.09■□□□□ 0.33
PSMA1-201ENST00000396394 PHKG2P15735 406 aa17.07■□□□□ 0.32
PSMA1-201ENST00000396394 RALBP1Q15311 655 aa17.07■□□□□ 0.32
PSMA1-201ENST00000396394 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
PSMA1-201ENST00000396394 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
PSMA1-201ENST00000396394 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
PSMA1-201ENST00000396394 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
PSMA1-201ENST00000396394 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
PSMA1-201ENST00000396394 KDRP35968 1356 aa17.05■□□□□ 0.32
PSMA1-201ENST00000396394 ZBED9Q6R2W3 1325 aa17.05■□□□□ 0.32
PSMA1-201ENST00000396394 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
PSMA1-201ENST00000396394 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
PSMA1-201ENST00000396394 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
PSMA1-201ENST00000396394 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
PSMA1-201ENST00000396394 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
PSMA1-201ENST00000396394 PIGBQ92521 554 aa17.04■□□□□ 0.32
PSMA1-201ENST00000396394 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
PSMA1-201ENST00000396394 NEFLP07196 543 aa17.03■□□□□ 0.32
PSMA1-201ENST00000396394 ZNF827Q17R98 1081 aa17.03■□□□□ 0.32
PSMA1-201ENST00000396394 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
PSMA1-201ENST00000396394 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
PSMA1-201ENST00000396394 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
PSMA1-201ENST00000396394 CASZ1Q86V15 1759 aa17.02■□□□□ 0.32
PSMA1-201ENST00000396394 LY75O60449 1722 aa17.02■□□□□ 0.31
PSMA1-201ENST00000396394 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
PSMA1-201ENST00000396394 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 KCNQ4P56696 695 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 MTFR1LQ9H019 292 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 ERICH6BQ5W0A0 696 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
PSMA1-201ENST00000396394 TFCP2L1Q9NZI6 479 aa17.01■□□□□ 0.31
PSMA1-201ENST00000396394 PPP1R1BQ9UD71 204 aaPredicted RBP17.01■□□□□ 0.31
PSMA1-201ENST00000396394 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
PSMA1-201ENST00000396394 FKBP8Q14318 412 aa17■□□□□ 0.31
PSMA1-201ENST00000396394 C1orf141Q5JVX7 400 aa17■□□□□ 0.31
PSMA1-201ENST00000396394 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
PSMA1-201ENST00000396394 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
PSMA1-201ENST00000396394 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
PSMA1-201ENST00000396394 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
PSMA1-201ENST00000396394 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
PSMA1-201ENST00000396394 PTGER2P43116 358 aa16.98■□□□□ 0.31
PSMA1-201ENST00000396394 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms