RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
DDR1-229ENST00000396342 FAM208AQ9UK61 1670 aaKnown RBP22.59■■□□□ 1.21
DDR1-229ENST00000396342 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
DDR1-229ENST00000396342 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
DDR1-229ENST00000396342 PDGFDQ9GZP0 370 aaPredicted RBP22.59■■□□□ 1.21
DDR1-229ENST00000396342 INSRP06213 1382 aa22.59■■□□□ 1.21
DDR1-229ENST00000396342 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
DDR1-229ENST00000396342 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
DDR1-229ENST00000396342 USHBP1Q8N6Y0 703 aa22.58■■□□□ 1.21
DDR1-229ENST00000396342 ARXQ96QS3 562 aa22.58■■□□□ 1.21
DDR1-229ENST00000396342 MSH5O43196 834 aa22.57■■□□□ 1.2
DDR1-229ENST00000396342 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
DDR1-229ENST00000396342 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
DDR1-229ENST00000396342 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
DDR1-229ENST00000396342 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
DDR1-229ENST00000396342 PTGER2P43116 358 aa22.56■■□□□ 1.2
DDR1-229ENST00000396342 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDR1-229ENST00000396342 FHDC1Q9C0D6 1143 aaPredicted RBP22.55■■□□□ 1.2
DDR1-229ENST00000396342 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
DDR1-229ENST00000396342 SYT17Q9BSW7 474 aa22.54■■□□□ 1.2
DDR1-229ENST00000396342 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
DDR1-229ENST00000396342 SPG7Q9UQ90 795 aa22.54■■□□□ 1.2
DDR1-229ENST00000396342 ZNF827Q17R98 1081 aa22.52■■□□□ 1.2
DDR1-229ENST00000396342 CARD14Q9BXL6 1004 aa22.52■■□□□ 1.2
DDR1-229ENST00000396342 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
DDR1-229ENST00000396342 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
DDR1-229ENST00000396342 MPRIPQ6WCQ1 1025 aa22.5■■□□□ 1.19
DDR1-229ENST00000396342 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
DDR1-229ENST00000396342 MEGF6O75095 1541 aa22.5■■□□□ 1.19
DDR1-229ENST00000396342 KAT6BQ8WYB5 2073 aa22.5■■□□□ 1.19
DDR1-229ENST00000396342 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
DDR1-229ENST00000396342 GPR162Q16538 588 aa22.48■■□□□ 1.19
DDR1-229ENST00000396342 CASZ1Q86V15 1759 aa22.48■■□□□ 1.19
DDR1-229ENST00000396342 BTAF1O14981 1849 aa22.47■■□□□ 1.19
DDR1-229ENST00000396342 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
DDR1-229ENST00000396342 KCNQ4P56696 695 aa22.46■■□□□ 1.19
DDR1-229ENST00000396342 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
DDR1-229ENST00000396342 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
DDR1-229ENST00000396342 PNPLA7Q6ZV29 1317 aa22.45■■□□□ 1.18
DDR1-229ENST00000396342 SGIP1Q9BQI5 828 aa22.44■■□□□ 1.18
DDR1-229ENST00000396342 AK7Q96M32 723 aa22.43■■□□□ 1.18
DDR1-229ENST00000396342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.18
DDR1-229ENST00000396342 PALLDQ8WX93 1383 aa22.42■■□□□ 1.18
DDR1-229ENST00000396342 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
DDR1-229ENST00000396342 NSD2O96028 1365 aa22.41■■□□□ 1.18
DDR1-229ENST00000396342 MAP3K5Q99683 1374 aa22.41■■□□□ 1.18
DDR1-229ENST00000396342 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
DDR1-229ENST00000396342 CYP27B1O15528 508 aa22.4■■□□□ 1.18
DDR1-229ENST00000396342 IFNL2Q8IZJ0 200 aa22.4■■□□□ 1.18
DDR1-229ENST00000396342 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
DDR1-229ENST00000396342 KNSTRNQ9Y448 316 aa22.4■■□□□ 1.18
DDR1-229ENST00000396342 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
DDR1-229ENST00000396342 MYOM1P52179 1685 aa22.39■■□□□ 1.18
DDR1-229ENST00000396342 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
DDR1-229ENST00000396342 EYA1Q99502 592 aa22.39■■□□□ 1.17
DDR1-229ENST00000396342 PANK3Q9H999 370 aa22.39■■□□□ 1.17
DDR1-229ENST00000396342 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
DDR1-229ENST00000396342 PAPPAQ13219 1627 aa22.38■■□□□ 1.17
DDR1-229ENST00000396342 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
DDR1-229ENST00000396342 COL23A1Q86Y22 540 aaPredicted RBP22.36■■□□□ 1.17
DDR1-229ENST00000396342 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
DDR1-229ENST00000396342 PLEKHO1Q53GL0 409 aaPredicted RBP22.35■■□□□ 1.17
DDR1-229ENST00000396342 PIGBQ92521 554 aa22.35■■□□□ 1.17
DDR1-229ENST00000396342 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
DDR1-229ENST00000396342 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
DDR1-229ENST00000396342 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
DDR1-229ENST00000396342 PHKG2P15735 406 aa22.32■■□□□ 1.16
DDR1-229ENST00000396342 AMOTQ4VCS5 1084 aa22.32■■□□□ 1.16
DDR1-229ENST00000396342 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
DDR1-229ENST00000396342 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
DDR1-229ENST00000396342 PHF14O94880 888 aa22.31■■□□□ 1.16
DDR1-229ENST00000396342 SIK1P57059 783 aa22.31■■□□□ 1.16
DDR1-229ENST00000396342 C1orf141Q5JVX7 400 aa22.31■■□□□ 1.16
DDR1-229ENST00000396342 ATP6V1AP38606 617 aa22.3■■□□□ 1.16
DDR1-229ENST00000396342 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
DDR1-229ENST00000396342 ZNF784Q8NCA9 323 aaPredicted RBP22.29■■□□□ 1.16
DDR1-229ENST00000396342 DCAF5Q96JK2 942 aa22.29■■□□□ 1.16
DDR1-229ENST00000396342 ERVV-2B6SEH9 535 aa22.28■■□□□ 1.16
DDR1-229ENST00000396342 SSFA2P28290 1259 aa22.28■■□□□ 1.16
DDR1-229ENST00000396342 CD2APQ9Y5K6 639 aa22.28■■□□□ 1.16
DDR1-229ENST00000396342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
DDR1-229ENST00000396342 CABP4P57796 275 aa22.27■■□□□ 1.16
DDR1-229ENST00000396342 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
DDR1-229ENST00000396342 ZNF530Q6P9A1 599 aaPredicted RBP22.27■■□□□ 1.16
DDR1-229ENST00000396342 GNPATO15228 680 aa22.26■■□□□ 1.15
DDR1-229ENST00000396342 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
DDR1-229ENST00000396342 IGSF1Q8N6C5 1336 aa22.25■■□□□ 1.15
DDR1-229ENST00000396342 LY75O60449 1722 aa22.24■■□□□ 1.15
DDR1-229ENST00000396342 MTHFSP49914 203 aa22.24■■□□□ 1.15
DDR1-229ENST00000396342 NLGN2Q8NFZ4 835 aa22.24■■□□□ 1.15
DDR1-229ENST00000396342 ASAP1Q9ULH1 1129 aa22.24■■□□□ 1.15
DDR1-229ENST00000396342 QSER1Q2KHR3 1735 aa22.23■■□□□ 1.15
DDR1-229ENST00000396342 SHANK3Q9BYB0 1731 aa22.23■■□□□ 1.15
DDR1-229ENST00000396342 RTCBQ9Y3I0 505 aaKnown RBP22.23■■□□□ 1.15
DDR1-229ENST00000396342 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
DDR1-229ENST00000396342 SULT6B1Q6IMI4 303 aa22.2■■□□□ 1.14
DDR1-229ENST00000396342 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
DDR1-229ENST00000396342 ATG3Q9NT62 314 aa22.2■■□□□ 1.14
DDR1-229ENST00000396342 PKD1L3Q7Z443 1732 aa22.19■■□□□ 1.14
DDR1-229ENST00000396342 C5P01031 1676 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms