RNA–Protein interactions for RNA: ENST00000396334.7

MYD88-201, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MYD88, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-201ENST00000396334 CWC22Q9HCG8 908 aaKnown RBP17.5■□□□□ 0.39
MYD88-201ENST00000396334 MCTP1Q6DN14 999 aa17.5■□□□□ 0.39
MYD88-201ENST00000396334 SMAP1Q8IYB5 467 aaPredicted RBP17.5■□□□□ 0.39
MYD88-201ENST00000396334 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
MYD88-201ENST00000396334 RICTORQ6R327 1708 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 FBLN1P23142 703 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
MYD88-201ENST00000396334 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 AATKQ6ZMQ8 1374 aa17.49■□□□□ 0.39
MYD88-201ENST00000396334 ANKRD44Q8N8A2 993 aa17.48■□□□□ 0.39
MYD88-201ENST00000396334 ELL2O00472 640 aaPredicted RBP17.48■□□□□ 0.39
MYD88-201ENST00000396334 ZNF500O60304 480 aaPredicted RBP17.48■□□□□ 0.39
MYD88-201ENST00000396334 LMOD3Q0VAK6 560 aa17.48■□□□□ 0.39
MYD88-201ENST00000396334 PKP1Q13835 747 aa17.47■□□□□ 0.39
MYD88-201ENST00000396334 CAVIN1Q6NZI2 390 aaKnown RBP17.46■□□□□ 0.39
MYD88-201ENST00000396334 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
MYD88-201ENST00000396334 RBSNQ9H1K0 784 aa17.46■□□□□ 0.39
MYD88-201ENST00000396334 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
MYD88-201ENST00000396334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
MYD88-201ENST00000396334 ZDHHC9Q9Y397 364 aa17.46■□□□□ 0.39
MYD88-201ENST00000396334 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
MYD88-201ENST00000396334 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
MYD88-201ENST00000396334 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
MYD88-201ENST00000396334 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.38
MYD88-201ENST00000396334 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
MYD88-201ENST00000396334 SDSP20132 328 aa17.45■□□□□ 0.38
MYD88-201ENST00000396334 GPT2Q8TD30 523 aa17.45■□□□□ 0.38
MYD88-201ENST00000396334 OTUD7AQ8TE49 926 aaPredicted RBP17.45■□□□□ 0.38
MYD88-201ENST00000396334 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
MYD88-201ENST00000396334 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
MYD88-201ENST00000396334 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
MYD88-201ENST00000396334 ST18O60284 1047 aa17.43■□□□□ 0.38
MYD88-201ENST00000396334 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
MYD88-201ENST00000396334 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
MYD88-201ENST00000396334 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
MYD88-201ENST00000396334 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
MYD88-201ENST00000396334 FGD1P98174 961 aa17.42■□□□□ 0.38
MYD88-201ENST00000396334 RAPGEF3O95398 923 aa17.42■□□□□ 0.38
MYD88-201ENST00000396334 C3P01024 1663 aa17.42■□□□□ 0.38
MYD88-201ENST00000396334 AKAP12Q02952 1782 aa17.42■□□□□ 0.38
MYD88-201ENST00000396334 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
MYD88-201ENST00000396334 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
MYD88-201ENST00000396334 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
MYD88-201ENST00000396334 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
MYD88-201ENST00000396334 CASC1Q6TDU7 716 aa17.41■□□□□ 0.38
MYD88-201ENST00000396334 MSH6P52701 1360 aa17.4■□□□□ 0.38
MYD88-201ENST00000396334 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
MYD88-201ENST00000396334 REC8O95072 547 aa17.4■□□□□ 0.38
MYD88-201ENST00000396334 CPS1P31327 1500 aa17.4■□□□□ 0.38
MYD88-201ENST00000396334 KIAA0232Q92628 1395 aa17.39■□□□□ 0.38
MYD88-201ENST00000396334 ZSCAN20P17040 1043 aaPredicted RBP17.39■□□□□ 0.37
MYD88-201ENST00000396334 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
MYD88-201ENST00000396334 DMTNQ08495 405 aa17.39■□□□□ 0.37
MYD88-201ENST00000396334 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
MYD88-201ENST00000396334 RBM27Q9P2N5 1060 aaKnown RBP17.39■□□□□ 0.37
MYD88-201ENST00000396334 NME9Q86XW9 330 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 ERC2O15083 957 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 NPM1P06748 294 aaKnown RBP eCLIP17.38■□□□□ 0.37
MYD88-201ENST00000396334 MCM5P33992 734 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 TSC1Q92574 1164 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 PTPRCP08575 1304 aa17.38■□□□□ 0.37
MYD88-201ENST00000396334 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
MYD88-201ENST00000396334 MTERF4Q7Z6M4 381 aaKnown RBP17.38■□□□□ 0.37
MYD88-201ENST00000396334 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
MYD88-201ENST00000396334 SASS6Q6UVJ0 657 aa17.37■□□□□ 0.37
MYD88-201ENST00000396334 CCDC94Q9BW85 323 aaPredicted RBP17.37■□□□□ 0.37
MYD88-201ENST00000396334 ITSN1Q15811 1721 aa17.36■□□□□ 0.37
MYD88-201ENST00000396334 CHL1O00533 1208 aa17.36■□□□□ 0.37
MYD88-201ENST00000396334 HAP1P54257 671 aaPredicted RBP17.36■□□□□ 0.37
MYD88-201ENST00000396334 WAPLQ7Z5K2 1190 aa17.36■□□□□ 0.37
MYD88-201ENST00000396334 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
MYD88-201ENST00000396334 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
MYD88-201ENST00000396334 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
MYD88-201ENST00000396334 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
MYD88-201ENST00000396334 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
MYD88-201ENST00000396334 MEIS3Q99687 375 aa17.35■□□□□ 0.37
MYD88-201ENST00000396334 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
MYD88-201ENST00000396334 MBD3O95983 291 aa17.34■□□□□ 0.37
MYD88-201ENST00000396334 CUL4AQ13619 759 aa17.34■□□□□ 0.37
MYD88-201ENST00000396334 UTP14CQ5TAP6 766 aaKnown RBP17.34■□□□□ 0.37
MYD88-201ENST00000396334 BRD1O95696 1058 aa17.34■□□□□ 0.37
MYD88-201ENST00000396334 IL17RAQ96F46 866 aa17.34■□□□□ 0.37
MYD88-201ENST00000396334 KRT24Q2M2I5 525 aa17.33■□□□□ 0.36
MYD88-201ENST00000396334 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
MYD88-201ENST00000396334 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.36
MYD88-201ENST00000396334 SALL3Q9BXA9 1300 aa17.33■□□□□ 0.36
MYD88-201ENST00000396334 SYCE3A1L190 88 aa17.33■□□□□ 0.36
MYD88-201ENST00000396334 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
MYD88-201ENST00000396334 MCM2P49736 904 aa17.32■□□□□ 0.36
MYD88-201ENST00000396334 PDE1AP54750 535 aa17.32■□□□□ 0.36
MYD88-201ENST00000396334 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
MYD88-201ENST00000396334 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
MYD88-201ENST00000396334 RRS1Q15050 365 aaKnown RBP17.32■□□□□ 0.36
MYD88-201ENST00000396334 COG3Q96JB2 828 aa17.32■□□□□ 0.36
MYD88-201ENST00000396334 CBX1P83916 185 aa17.31■□□□□ 0.36
MYD88-201ENST00000396334 ZNF710Q8N1W2 664 aa17.31■□□□□ 0.36
MYD88-201ENST00000396334 CRB1P82279 1406 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms