RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
LDHC-202ENST00000396215 POLA2Q14181 598 aa14.08□□□□□ -0.16
LDHC-202ENST00000396215 ERBB3P21860 1342 aa14.08□□□□□ -0.16
LDHC-202ENST00000396215 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
LDHC-202ENST00000396215 DNAJC5GQ8N7S2 189 aa14.07□□□□□ -0.16
LDHC-202ENST00000396215 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
LDHC-202ENST00000396215 PCNTO95613 3336 aa14.06□□□□□ -0.16
LDHC-202ENST00000396215 APLP1P51693 650 aa14.06□□□□□ -0.16
LDHC-202ENST00000396215 LY75O60449 1722 aa14.06□□□□□ -0.16
LDHC-202ENST00000396215 KIF3CO14782 793 aa14.05□□□□□ -0.16
LDHC-202ENST00000396215 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
LDHC-202ENST00000396215 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
LDHC-202ENST00000396215 COL23A1Q86Y22 540 aaPredicted RBP14.03□□□□□ -0.16
LDHC-202ENST00000396215 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
LDHC-202ENST00000396215 USP31Q70CQ4 1352 aa14.03□□□□□ -0.16
LDHC-202ENST00000396215 USP54Q70EL1 1684 aa14.02□□□□□ -0.16
LDHC-202ENST00000396215 NSD2O96028 1365 aa14.01□□□□□ -0.17
LDHC-202ENST00000396215 ANKRD36BQ8N2N9 1353 aa14.01□□□□□ -0.17
LDHC-202ENST00000396215 SOX12O15370 315 aa14.01□□□□□ -0.17
LDHC-202ENST00000396215 EVC2Q86UK5 1308 aa14□□□□□ -0.17
LDHC-202ENST00000396215 KCNQ4P56696 695 aa14□□□□□ -0.17
LDHC-202ENST00000396215 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
LDHC-202ENST00000396215 ANKRD24Q8TF21 1146 aa13.99□□□□□ -0.17
LDHC-202ENST00000396215 TOMM70O94826 608 aa13.98□□□□□ -0.17
LDHC-202ENST00000396215 HMGB2P26583 209 aaKnown RBP13.98□□□□□ -0.17
LDHC-202ENST00000396215 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
LDHC-202ENST00000396215 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
LDHC-202ENST00000396215 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
LDHC-202ENST00000396215 LTN1O94822 1766 aa13.97□□□□□ -0.17
LDHC-202ENST00000396215 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
LDHC-202ENST00000396215 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
LDHC-202ENST00000396215 CICQ96RK0 1608 aaPredicted RBP13.97□□□□□ -0.17
LDHC-202ENST00000396215 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
LDHC-202ENST00000396215 COL13A1Q5TAT6 717 aaPredicted RBP13.96□□□□□ -0.17
LDHC-202ENST00000396215 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
LDHC-202ENST00000396215 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
LDHC-202ENST00000396215 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
LDHC-202ENST00000396215 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
LDHC-202ENST00000396215 POTEHQ6S545 545 aa13.95□□□□□ -0.18
LDHC-202ENST00000396215 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
LDHC-202ENST00000396215 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
LDHC-202ENST00000396215 PRELPP51888 382 aa13.94□□□□□ -0.18
LDHC-202ENST00000396215 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
LDHC-202ENST00000396215 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
LDHC-202ENST00000396215 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
LDHC-202ENST00000396215 C5P01031 1676 aa13.92□□□□□ -0.18
LDHC-202ENST00000396215 IP6K1Q92551 441 aa13.92□□□□□ -0.18
LDHC-202ENST00000396215 USP47Q96K76 1375 aa13.92□□□□□ -0.18
LDHC-202ENST00000396215 TAF1LQ8IZX4 1826 aa13.92□□□□□ -0.18
LDHC-202ENST00000396215 ZCRB1Q8TBF4 217 aaKnown RBP13.91□□□□□ -0.18
LDHC-202ENST00000396215 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
LDHC-202ENST00000396215 NME9Q86XW9 330 aa13.9□□□□□ -0.18
LDHC-202ENST00000396215 RBM46Q8TBY0 533 aaKnown RBP13.9□□□□□ -0.18
LDHC-202ENST00000396215 CD163L1Q9NR16 1453 aa13.9□□□□□ -0.18
LDHC-202ENST00000396215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDHC-202ENST00000396215 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
LDHC-202ENST00000396215 FSTL1Q12841 308 aa13.87□□□□□ -0.19
LDHC-202ENST00000396215 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
LDHC-202ENST00000396215 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
LDHC-202ENST00000396215 UBR3Q6ZT12 1888 aa13.87□□□□□ -0.19
LDHC-202ENST00000396215 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
LDHC-202ENST00000396215 C4BP0C0L5 1744 aa13.86□□□□□ -0.19
LDHC-202ENST00000396215 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
LDHC-202ENST00000396215 MEGF6O75095 1541 aa13.85□□□□□ -0.19
LDHC-202ENST00000396215 EDC4Q6P2E9 1401 aaKnown RBP13.85□□□□□ -0.19
LDHC-202ENST00000396215 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
LDHC-202ENST00000396215 NMRK2Q9NPI5 230 aa13.85□□□□□ -0.19
LDHC-202ENST00000396215 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
LDHC-202ENST00000396215 SSFA2P28290 1259 aa13.84□□□□□ -0.19
LDHC-202ENST00000396215 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
LDHC-202ENST00000396215 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
LDHC-202ENST00000396215 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
LDHC-202ENST00000396215 TGFB2P61812 414 aa13.83□□□□□ -0.2
LDHC-202ENST00000396215 AK7Q96M32 723 aa13.83□□□□□ -0.2
LDHC-202ENST00000396215 WWC3Q9ULE0 1092 aa13.83□□□□□ -0.2
LDHC-202ENST00000396215 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
LDHC-202ENST00000396215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
LDHC-202ENST00000396215 HOXC9P31274 260 aa13.82□□□□□ -0.2
LDHC-202ENST00000396215 HTRA3P83110 453 aa13.82□□□□□ -0.2
LDHC-202ENST00000396215 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
LDHC-202ENST00000396215 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
LDHC-202ENST00000396215 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
LDHC-202ENST00000396215 SLC34A2O95436 690 aa13.8□□□□□ -0.2
LDHC-202ENST00000396215 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
LDHC-202ENST00000396215 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
LDHC-202ENST00000396215 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
LDHC-202ENST00000396215 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
LDHC-202ENST00000396215 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
LDHC-202ENST00000396215 C16orf71Q8IYS4 520 aaPredicted RBP13.79□□□□□ -0.2
LDHC-202ENST00000396215 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
LDHC-202ENST00000396215 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
LDHC-202ENST00000396215 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
LDHC-202ENST00000396215 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 ARHGAP27Q6ZUM4 889 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
LDHC-202ENST00000396215 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 BCS1LQ9Y276 419 aa13.78□□□□□ -0.2
LDHC-202ENST00000396215 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms