RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 EXOC5O00471 708 aa9.09□□□□□ -0.95
LMO3-205ENST00000396205 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
LMO3-205ENST00000396205 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
LMO3-205ENST00000396205 EP400Q96L91 3159 aa9.09□□□□□ -0.95
LMO3-205ENST00000396205 POLKQ9UBT6 870 aa9.08□□□□□ -0.96
LMO3-205ENST00000396205 UBR3Q6ZT12 1888 aa9.08□□□□□ -0.96
LMO3-205ENST00000396205 AMPHP49418 695 aa9.07□□□□□ -0.96
LMO3-205ENST00000396205 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
LMO3-205ENST00000396205 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
LMO3-205ENST00000396205 GGNBP2Q9H3C7 697 aa9.07□□□□□ -0.96
LMO3-205ENST00000396205 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
LMO3-205ENST00000396205 PANK3Q9H999 370 aa9.06□□□□□ -0.96
LMO3-205ENST00000396205 TJP1Q07157 1748 aa9.06□□□□□ -0.96
LMO3-205ENST00000396205 KIF13BQ9NQT8 1826 aa9.06□□□□□ -0.96
LMO3-205ENST00000396205 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
LMO3-205ENST00000396205 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
LMO3-205ENST00000396205 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
LMO3-205ENST00000396205 ZCRB1Q8TBF4 217 aaKnown RBP9.04□□□□□ -0.96
LMO3-205ENST00000396205 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
LMO3-205ENST00000396205 KNSTRNQ9Y448 316 aa9.04□□□□□ -0.96
LMO3-205ENST00000396205 TRIM37O94972 964 aa9.03□□□□□ -0.96
LMO3-205ENST00000396205 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
LMO3-205ENST00000396205 RRS1Q15050 365 aaKnown RBP9.03□□□□□ -0.96
LMO3-205ENST00000396205 HSP90AB2PQ58FF8 381 aa9.03□□□□□ -0.96
LMO3-205ENST00000396205 APBA3O96018 575 aa9.02□□□□□ -0.96
LMO3-205ENST00000396205 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.96
LMO3-205ENST00000396205 EIF4A2Q14240 407 aaKnown RBP9.02□□□□□ -0.97
LMO3-205ENST00000396205 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
LMO3-205ENST00000396205 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.97
LMO3-205ENST00000396205 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
LMO3-205ENST00000396205 DEFB132Q7Z7B7 95 aa9.02□□□□□ -0.97
LMO3-205ENST00000396205 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
LMO3-205ENST00000396205 C4AP0C0L4 1744 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 HSP90AB1P08238 724 aaKnown RBP9.01□□□□□ -0.97
LMO3-205ENST00000396205 IL13P35225 146 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
LMO3-205ENST00000396205 RAPGEF4Q8WZA2 1011 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 A0A0G2JS52 829 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 EYA1Q99502 592 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 USP35Q9P2H5 1018 aa9.01□□□□□ -0.97
LMO3-205ENST00000396205 PROM2Q8N271 834 aa9□□□□□ -0.97
LMO3-205ENST00000396205 AKT1S1Q96B36 256 aa9□□□□□ -0.97
LMO3-205ENST00000396205 KDM6AO15550 1401 aaPredicted RBP9□□□□□ -0.97
LMO3-205ENST00000396205 KDM3BQ7LBC6 1761 aa9□□□□□ -0.97
LMO3-205ENST00000396205 ERVV-2B6SEH9 535 aa9□□□□□ -0.97
LMO3-205ENST00000396205 MORC1Q86VD1 984 aa9□□□□□ -0.97
LMO3-205ENST00000396205 SLC16A10Q8TF71 515 aa8.99□□□□□ -0.97
LMO3-205ENST00000396205 SMARCC1Q92922 1105 aaPredicted RBP8.99□□□□□ -0.97
LMO3-205ENST00000396205 KIAA1551Q9HCM1 1747 aa8.99□□□□□ -0.97
LMO3-205ENST00000396205 NRXN2Q9P2S2 1712 aa8.99□□□□□ -0.97
LMO3-205ENST00000396205 KCPQ6ZWJ8 1503 aa8.99□□□□□ -0.97
LMO3-205ENST00000396205 CYP27B1O15528 508 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 PHKG2P15735 406 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 TXNRD1Q16881 649 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 BCORQ6W2J9 1755 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 SCN7AQ01118 1682 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 IFNL2Q8IZJ0 200 aa8.98□□□□□ -0.97
LMO3-205ENST00000396205 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 DLEC1Q9Y238 1755 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 SOX12O15370 315 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 PLEKHG5O94827 1062 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 SLC15A2Q16348 729 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 SGIP1Q9BQI5 828 aa8.97□□□□□ -0.97
LMO3-205ENST00000396205 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.98
LMO3-205ENST00000396205 FAM182BQ5T319 152 aa8.96□□□□□ -0.98
LMO3-205ENST00000396205 FLAD1Q8NFF5 587 aa8.96□□□□□ -0.98
LMO3-205ENST00000396205 ZEB1P37275 1124 aaPredicted RBP8.96□□□□□ -0.98
LMO3-205ENST00000396205 CEMIPQ8WUJ3 1361 aa8.96□□□□□ -0.98
LMO3-205ENST00000396205 PALLDQ8WX93 1383 aa8.96□□□□□ -0.98
LMO3-205ENST00000396205 BRCA1P38398 1863 aaKnown RBP8.95□□□□□ -0.98
LMO3-205ENST00000396205 STK32BQ9NY57 414 aa8.95□□□□□ -0.98
LMO3-205ENST00000396205 FBLN1P23142 703 aa8.94□□□□□ -0.98
LMO3-205ENST00000396205 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
LMO3-205ENST00000396205 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
LMO3-205ENST00000396205 KCNQ2O43526 872 aa8.94□□□□□ -0.98
LMO3-205ENST00000396205 MTFR1LQ9H019 292 aa8.94□□□□□ -0.98
LMO3-205ENST00000396205 ANO8Q9HCE9 1232 aaPredicted RBP8.94□□□□□ -0.98
LMO3-205ENST00000396205 RC3H1Q5TC82 1133 aaKnown RBP8.94□□□□□ -0.98
LMO3-205ENST00000396205 RGL2O15211 777 aa8.93□□□□□ -0.98
LMO3-205ENST00000396205 ARFGEF2Q9Y6D5 1785 aa8.93□□□□□ -0.98
LMO3-205ENST00000396205 HTATSF1O43719 755 aaKnown RBP8.93□□□□□ -0.98
LMO3-205ENST00000396205 PTF1AQ7RTS3 328 aa8.93□□□□□ -0.98
LMO3-205ENST00000396205 DIAPH1O60610 1272 aaKnown RBP8.93□□□□□ -0.98
LMO3-205ENST00000396205 LRRC4BQ9NT99 713 aa8.93□□□□□ -0.98
LMO3-205ENST00000396205 ADRA2BP18089 450 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 PTGER2P43116 358 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 MTHFSP49914 203 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 RALBP1Q15311 655 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 PRIM1P49642 420 aaKnown RBP8.92□□□□□ -0.98
LMO3-205ENST00000396205 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 LTV1Q96GA3 475 aaPredicted RBP8.92□□□□□ -0.98
LMO3-205ENST00000396205 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 PNPLA7Q6ZV29 1317 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 SSFA2P28290 1259 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 ARFGEF1Q9Y6D6 1849 aa8.92□□□□□ -0.98
LMO3-205ENST00000396205 MYH14Q7Z406 1995 aaKnown RBP8.91□□□□□ -0.98
LMO3-205ENST00000396205 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms