RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
THUMPD1-202ENST00000396083 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
THUMPD1-202ENST00000396083 KCNQ2O43526 872 aa13.56□□□□□ -0.24
THUMPD1-202ENST00000396083 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
THUMPD1-202ENST00000396083 LRRC37A3O60309 1634 aa13.56□□□□□ -0.24
THUMPD1-202ENST00000396083 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
THUMPD1-202ENST00000396083 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
THUMPD1-202ENST00000396083 DISP2A7MBM2 1401 aa13.55□□□□□ -0.24
THUMPD1-202ENST00000396083 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
THUMPD1-202ENST00000396083 FAM208AQ9UK61 1670 aaKnown RBP13.55□□□□□ -0.24
THUMPD1-202ENST00000396083 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
THUMPD1-202ENST00000396083 CDCA7Q9BWT1 371 aaPredicted RBP13.55□□□□□ -0.24
THUMPD1-202ENST00000396083 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
THUMPD1-202ENST00000396083 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 RALBP1Q15311 655 aa13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 CCDC184Q52MB2 194 aa13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 CYP27B1O15528 508 aa13.53□□□□□ -0.24
THUMPD1-202ENST00000396083 TNS2Q63HR2 1409 aa13.52□□□□□ -0.24
THUMPD1-202ENST00000396083 EN1Q05925 392 aaPredicted RBP13.52□□□□□ -0.24
THUMPD1-202ENST00000396083 ANP32CO43423 234 aa13.52□□□□□ -0.25
THUMPD1-202ENST00000396083 APBA3O96018 575 aa13.52□□□□□ -0.25
THUMPD1-202ENST00000396083 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
THUMPD1-202ENST00000396083 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
THUMPD1-202ENST00000396083 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 ZNF530Q6P9A1 599 aaPredicted RBP13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
THUMPD1-202ENST00000396083 KCNQ4P56696 695 aa13.49□□□□□ -0.25
THUMPD1-202ENST00000396083 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
THUMPD1-202ENST00000396083 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
THUMPD1-202ENST00000396083 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
THUMPD1-202ENST00000396083 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
THUMPD1-202ENST00000396083 UTRNP46939 3433 aa13.48□□□□□ -0.25
THUMPD1-202ENST00000396083 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
THUMPD1-202ENST00000396083 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
THUMPD1-202ENST00000396083 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
THUMPD1-202ENST00000396083 PLEKHO1Q53GL0 409 aaPredicted RBP13.47□□□□□ -0.25
THUMPD1-202ENST00000396083 PHKG2P15735 406 aa13.46□□□□□ -0.25
THUMPD1-202ENST00000396083 SHANK3Q9BYB0 1731 aa13.46□□□□□ -0.25
THUMPD1-202ENST00000396083 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
THUMPD1-202ENST00000396083 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
THUMPD1-202ENST00000396083 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
THUMPD1-202ENST00000396083 KDRP35968 1356 aa13.46□□□□□ -0.26
THUMPD1-202ENST00000396083 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.26
THUMPD1-202ENST00000396083 BAG6P46379 1132 aa13.45□□□□□ -0.26
THUMPD1-202ENST00000396083 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
THUMPD1-202ENST00000396083 SBF2Q86WG5 1849 aa13.45□□□□□ -0.26
THUMPD1-202ENST00000396083 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
THUMPD1-202ENST00000396083 NCAPD2Q15021 1401 aa13.45□□□□□ -0.26
THUMPD1-202ENST00000396083 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
THUMPD1-202ENST00000396083 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
THUMPD1-202ENST00000396083 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
THUMPD1-202ENST00000396083 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
THUMPD1-202ENST00000396083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.268e-8■■□□□ 11.5
THUMPD1-202ENST00000396083 FCHSD2O94868 740 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 PIGBQ92521 554 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 NEFMP07197 916 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 MCM10Q7L590 875 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
THUMPD1-202ENST00000396083 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 TNS1Q9HBL0 1735 aaKnown RBP13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 CABP4P57796 275 aa13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 PROM2Q8N271 834 aa13.4□□□□□ -0.26
THUMPD1-202ENST00000396083 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 BTAF1O14981 1849 aa13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
THUMPD1-202ENST00000396083 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
THUMPD1-202ENST00000396083 TXNRD1Q16881 649 aa13.38□□□□□ -0.27
THUMPD1-202ENST00000396083 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
THUMPD1-202ENST00000396083 ITGB4P16144 1822 aa13.38□□□□□ -0.27
THUMPD1-202ENST00000396083 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 MIER1Q8N108 512 aa13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 LRRC4BQ9NT99 713 aa13.37□□□□□ -0.27
THUMPD1-202ENST00000396083 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
THUMPD1-202ENST00000396083 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms