RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 PKNOX2Q96KN3 472 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 KIAA0232Q92628 1395 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 RICTORQ6R327 1708 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 MBD3O95983 291 aa10.67□□□□□ -0.7
BDNF-204ENST00000395980 PTPRCP08575 1304 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 SDSP20132 328 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 RBSNQ9H1K0 784 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 MCM2P49736 904 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 LRSAM1Q6UWE0 723 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 OSBPL3Q9H4L5 887 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
BDNF-204ENST00000395980 MON2Q7Z3U7 1717 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 RIMBP3CA6NJZ7 1639 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 RIMBP3BA6NNM3 1639 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 RIMBP3Q9UFD9 1639 aa10.66□□□□□ -0.7
BDNF-204ENST00000395980 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
BDNF-204ENST00000395980 ERC2O15083 957 aa10.65□□□□□ -0.7
BDNF-204ENST00000395980 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.7
BDNF-204ENST00000395980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
BDNF-204ENST00000395980 ZMYND15Q9H091 742 aa10.65□□□□□ -0.7
BDNF-204ENST00000395980 ZKSCAN5Q9Y2L8 839 aa10.65□□□□□ -0.7
BDNF-204ENST00000395980 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.71
BDNF-204ENST00000395980 GPT2Q8TD30 523 aa10.65□□□□□ -0.71
BDNF-204ENST00000395980 ZDHHC9Q9Y397 364 aa10.65□□□□□ -0.71
BDNF-204ENST00000395980 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.71
BDNF-204ENST00000395980 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
BDNF-204ENST00000395980 CCDC39Q9UFE4 941 aa10.64□□□□□ -0.71
BDNF-204ENST00000395980 HMMRO75330 724 aa10.64□□□□□ -0.71
BDNF-204ENST00000395980 PRPF40AO75400 957 aaKnown RBP10.64□□□□□ -0.71
BDNF-204ENST00000395980 PKP1Q13835 747 aa10.63□□□□□ -0.71
BDNF-204ENST00000395980 MTERF4Q7Z6M4 381 aaKnown RBP10.63□□□□□ -0.71
BDNF-204ENST00000395980 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
BDNF-204ENST00000395980 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
BDNF-204ENST00000395980 MSH6P52701 1360 aa10.63□□□□□ -0.71
BDNF-204ENST00000395980 ZGPATQ8N5A5 531 aaKnown RBP10.63□□□□□ -0.71
BDNF-204ENST00000395980 IL17RAQ96F46 866 aa10.63□□□□□ -0.71
BDNF-204ENST00000395980 C3P01024 1663 aa10.63□□□□□ -0.71
BDNF-204ENST00000395980 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 CHL1O00533 1208 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 CUL4AQ13619 759 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
BDNF-204ENST00000395980 INTS4Q96HW7 963 aaKnown RBP10.62□□□□□ -0.71
BDNF-204ENST00000395980 TUBGCP6Q96RT7 1819 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 ANAPC15P60006 121 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 TMEM63CQ9P1W3 806 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 BRD1O95696 1058 aa10.62□□□□□ -0.71
BDNF-204ENST00000395980 SYAP1Q96A49 352 aaPredicted RBP10.61□□□□□ -0.71
BDNF-204ENST00000395980 COG3Q96JB2 828 aa10.61□□□□□ -0.71
BDNF-204ENST00000395980 EPB41L2O43491 1005 aaKnown RBP10.61□□□□□ -0.71
BDNF-204ENST00000395980 FBLN1P23142 703 aa10.61□□□□□ -0.71
BDNF-204ENST00000395980 RAPGEF3O95398 923 aa10.61□□□□□ -0.71
BDNF-204ENST00000395980 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 DYNC1I1O14576 645 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 MCCP23508 829 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 NME9Q86XW9 330 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
BDNF-204ENST00000395980 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
BDNF-204ENST00000395980 WASLO00401 505 aaPredicted RBP10.6□□□□□ -0.71
BDNF-204ENST00000395980 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 TMX3Q96JJ7 454 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 CPS1P31327 1500 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 FAM83GA6ND36 823 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 PDE1AP54750 535 aa10.6□□□□□ -0.71
BDNF-204ENST00000395980 ARHGEF10O15013 1369 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 PHF14O94880 888 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 MEIS3Q99687 375 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 A2ML1A8K2U0 1454 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 SYCE3A1L190 88 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 SMARCA5O60264 1052 aaPredicted RBP10.59□□□□□ -0.71
BDNF-204ENST00000395980 CCT4P50991 539 aaKnown RBP10.59□□□□□ -0.71
BDNF-204ENST00000395980 SASS6Q6UVJ0 657 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 SALL3Q9BXA9 1300 aa10.59□□□□□ -0.71
BDNF-204ENST00000395980 SIRT1Q96EB6 747 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 TSPY26PQ9H489 355 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 UQCRHLA0A096LP55 91 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 UQCRHP07919 91 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 NEK4P51957 841 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 XPCQ01831 940 aaPredicted RBP10.58□□□□□ -0.72
BDNF-204ENST00000395980 FAM184AQ8NB25 1140 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 ESYT1Q9BSJ8 1104 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 TECPR2O15040 1411 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 DCTN1Q14203 1278 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 SPATA31D1Q6ZQQ2 1576 aa10.58□□□□□ -0.72
BDNF-204ENST00000395980 CRB1P82279 1406 aa10.57□□□□□ -0.72
BDNF-204ENST00000395980 WAPLQ7Z5K2 1190 aa10.57□□□□□ -0.72
BDNF-204ENST00000395980 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
BDNF-204ENST00000395980 AOX1Q06278 1338 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 N4BP2Q86UW6 1770 aaPredicted RBP10.56□□□□□ -0.72
BDNF-204ENST00000395980 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 STAG3Q9UJ98 1225 aa10.56□□□□□ -0.72
BDNF-204ENST00000395980 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
BDNF-204ENST00000395980 RRS1Q15050 365 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms