RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 CEP57L1Q8IYX8 460 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 TSR2Q969E8 191 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 K7ELQ4 463 aaPredicted RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 RRP9O43818 475 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 MBD3O95983 291 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 ZNF76P36508 570 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 LMAN1P49257 510 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 LARP1BQ659C4 914 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 TRMT1LQ7Z2T5 733 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC85AQ96PX6 553 aaPredicted RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 NUP62CLQ9H1M0 184 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 GGNBP2Q9H3C7 697 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 CABP2Q9NPB3 220 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 EVC2Q86UK5 1308 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 BCAR3O75815 825 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 STAMBPO95630 424 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 GTF2A1P52655 376 aaPredicted RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 FKBP4Q02790 459 aaKnown RBP eCLIP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 SLC4A8Q2Y0W8 1093 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 ARHGAP29Q52LW3 1261 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 WDR78Q5VTH9 848 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 KIF6Q6ZMV9 814 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 PAIP2Q9BPZ3 127 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 ZSWIM4Q9H7M6 989 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 PDRG1Q9NUG6 133 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 ZNF219Q9P2Y4 722 aaPredicted RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 CYP46A1Q9Y6A2 500 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 MAATS1Q7Z4T9 603 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 JAKMIP1Q96N16 626 aaKnown RBP4.71□□□□□ -1.66
NCOA1-203ENST00000395856 MMRN2Q9H8L6 949 aa4.71□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC96Q2M329 555 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 UBXN4Q92575 508 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 C16orf45Q96MC5 204 aaPredicted RBP4.7□□□□□ -1.66
NCOA1-203ENST00000395856 RNF216Q9NWF9 866 aaPredicted RBP4.7□□□□□ -1.66
NCOA1-203ENST00000395856 COMMD10Q9Y6G5 202 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 FMN1Q68DA7 1419 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 GSTTP1A0A1W2PQM5 241 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 SLC3A2P08195 630 aaKnown RBP4.7□□□□□ -1.66
NCOA1-203ENST00000395856 EP400NLQ6ZTU2 488 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 PPFIA3O75145 1194 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 CTR9Q6PD62 1173 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 SOGA3Q5TF21 947 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 SPTY2D1Q68D10 685 aaPredicted RBP4.7□□□□□ -1.66
NCOA1-203ENST00000395856 LUZP1Q86V48 1076 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 NUTM1Q86Y26 1132 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 LUC7LQ9NQ29 371 aaKnown RBP4.7□□□□□ -1.66
NCOA1-203ENST00000395856 RAD54L2Q9Y4B4 1467 aa4.7□□□□□ -1.66
NCOA1-203ENST00000395856 CA8P35219 290 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 PIP4K2AP48426 406 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 PPARDQ03181 441 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CASTP20810 708 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 PTPN14Q15678 1187 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC158Q5M9N0 1113 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 FERMT3Q86UX7 667 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC83Q8IWF9 413 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 ZNF830Q96NB3 372 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 NUP88Q99567 741 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 NLRP2Q9NX02 1062 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 RBM27Q9P2N5 1060 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CLIP2Q9UDT6 1046 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CARMIL1Q5VZK9 1371 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC144AA2RUR9 1427 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 EXOSC9Q06265 439 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 KIF4BQ2VIQ3 1234 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 SCLT1Q96NL6 688 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 SMARCA5O60264 1052 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 SPA17Q15506 151 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 ZSCAN29Q8IWY8 852 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 ZNF397Q8NF99 534 aaPredicted RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 DRC1Q96MC2 740 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 ESPNB1AK53 854 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 GNAI1P63096 354 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 KRT85P78386 507 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 BMS1Q14692 1282 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 BICDL1Q6ZP65 573 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 NGLY1Q96IV0 654 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 MXRA7P84157 204 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 HLTFQ14527 1009 aaKnown RBP eCLIP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 LARP1Q6PKG0 1096 aaKnown RBP4.69□□□□□ -1.66
NCOA1-203ENST00000395856 AACSQ86V21 672 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 CKAP2LQ8IYA6 745 aa4.69□□□□□ -1.66
NCOA1-203ENST00000395856 KIF5CO60282 957 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 MNAT1P51948 309 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 STRN4Q9NRL3 753 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 NOL7Q9UMY1 257 aaKnown RBP4.68□□□□□ -1.66
NCOA1-203ENST00000395856 WDR33Q9C0J8 1336 aaKnown RBP4.68□□□□□ -1.66
NCOA1-203ENST00000395856 GCOM1H8Y6P7 765 aaPredicted RBP4.68□□□□□ -1.66
NCOA1-203ENST00000395856 MYZAPP0CAP1 466 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 TDO2P48775 406 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC57Q2TAC2 916 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 CCDC144CPQ8IYA2 1237 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 TRIM22Q8IYM9 498 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 ADAMTS8Q9UP79 889 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 BIN1O00499 593 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 FAM160A1Q05DH4 1040 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 MICALCLQ6ZW33 695 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 CACNA2D4Q7Z3S7 1137 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 TMC6Q7Z403 805 aa4.68□□□□□ -1.66
NCOA1-203ENST00000395856 RAB11FIP4Q86YS3 637 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms