RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.57
RAE1-202ENST00000395840 SMAP1Q8IYB5 467 aaPredicted RBP11.46□□□□□ -0.57
RAE1-202ENST00000395840 RTL1A6NKG5 1358 aa11.46□□□□□ -0.57
RAE1-202ENST00000395840 FAM83GA6ND36 823 aa11.46□□□□□ -0.58
RAE1-202ENST00000395840 TRIM44Q96DX7 344 aaPredicted RBP11.46□□□□□ -0.58
RAE1-202ENST00000395840 TRPC5Q9UL62 973 aaPredicted RBP11.46□□□□□ -0.58
RAE1-202ENST00000395840 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
RAE1-202ENST00000395840 CHMP4BQ9H444 224 aaKnown RBP11.45□□□□□ -0.58
RAE1-202ENST00000395840 PLCH1Q4KWH8 1693 aa11.45□□□□□ -0.58
RAE1-202ENST00000395840 RIPK4P57078 832 aa11.45□□□□□ -0.58
RAE1-202ENST00000395840 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
RAE1-202ENST00000395840 BLMP54132 1417 aaPredicted RBP11.45□□□□□ -0.58
RAE1-202ENST00000395840 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
RAE1-202ENST00000395840 EVA1CP58658 441 aa11.44□□□□□ -0.58
RAE1-202ENST00000395840 ZRANB1Q9UGI0 708 aa11.44□□□□□ -0.58
RAE1-202ENST00000395840 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
RAE1-202ENST00000395840 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
RAE1-202ENST00000395840 AMPHP49418 695 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 VPS72Q15906 364 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 IP6K1Q92551 441 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 BECN1Q14457 450 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 GRPEL1Q9HAV7 217 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 PRDM10Q9NQV6 1147 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
RAE1-202ENST00000395840 BCL9LQ86UU0 1499 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 CENPQQ7L2Z9 268 aaPredicted RBP11.42□□□□□ -0.58
RAE1-202ENST00000395840 ARID3AQ99856 593 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 LTN1O94822 1766 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 ATRNO75882 1429 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 SOX12O15370 315 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
RAE1-202ENST00000395840 QTRT2Q9H974 415 aaKnown RBP11.42□□□□□ -0.58
RAE1-202ENST00000395840 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 RBM6P78332 1123 aaKnown RBP11.41□□□□□ -0.58
RAE1-202ENST00000395840 FLT4P35916 1363 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 NRAPQ86VF7 1730 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 CHRNA2Q15822 529 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
RAE1-202ENST00000395840 MAP3K19Q56UN5 1328 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 COL18A1P39060 1754 aa11.41□□□□□ -0.58
RAE1-202ENST00000395840 RXRBP28702 533 aa11.4□□□□□ -0.58
RAE1-202ENST00000395840 FAM208AQ9UK61 1670 aaKnown RBP11.4□□□□□ -0.58
RAE1-202ENST00000395840 MCM4P33991 863 aa11.4□□□□□ -0.58
RAE1-202ENST00000395840 RALBP1Q15311 655 aa11.4□□□□□ -0.58
RAE1-202ENST00000395840 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
RAE1-202ENST00000395840 CDK12Q9NYV4 1490 aaPredicted RBP11.4□□□□□ -0.58
RAE1-202ENST00000395840 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
RAE1-202ENST00000395840 INSRP06213 1382 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 HOXC9P31274 260 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
RAE1-202ENST00000395840 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
RAE1-202ENST00000395840 CRB1P82279 1406 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 TRAK2O60296 914 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
RAE1-202ENST00000395840 CDCA7Q9BWT1 371 aaPredicted RBP11.39□□□□□ -0.59
RAE1-202ENST00000395840 RGS17Q9UGC6 210 aaPredicted RBP11.39□□□□□ -0.59
RAE1-202ENST00000395840 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
RAE1-202ENST00000395840 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 POLKQ9UBT6 870 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 OFD1O75665 1012 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 PDE3BQ13370 1112 aa11.38□□□□□ -0.59
RAE1-202ENST00000395840 RRS1Q15050 365 aaKnown RBP11.38□□□□□ -0.59
RAE1-202ENST00000395840 MAP2P11137 1827 aaKnown RBP11.37□□□□□ -0.59
RAE1-202ENST00000395840 ERBB3P21860 1342 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 DMTNQ08495 405 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 ANKRD24Q8TF21 1146 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
RAE1-202ENST00000395840 UTP14CQ5TAP6 766 aaKnown RBP11.37□□□□□ -0.59
RAE1-202ENST00000395840 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
RAE1-202ENST00000395840 TNNT2P45379 298 aaPredicted RBP11.36□□□□□ -0.59
RAE1-202ENST00000395840 TCP11L2Q8N4U5 519 aa11.36□□□□□ -0.59
RAE1-202ENST00000395840 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
RAE1-202ENST00000395840 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
RAE1-202ENST00000395840 TERF1P54274 439 aa11.36□□□□□ -0.59
RAE1-202ENST00000395840 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.36□□□□□ -0.59
RAE1-202ENST00000395840 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
RAE1-202ENST00000395840 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
RAE1-202ENST00000395840 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
RAE1-202ENST00000395840 SEC24BO95487 1268 aa11.35□□□□□ -0.59
RAE1-202ENST00000395840 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
RAE1-202ENST00000395840 PLEKHG2Q9H7P9 1386 aa11.35□□□□□ -0.59
RAE1-202ENST00000395840 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
RAE1-202ENST00000395840 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
RAE1-202ENST00000395840 EMILIN1Q9Y6C2 1016 aa11.35□□□□□ -0.59
RAE1-202ENST00000395840 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
RAE1-202ENST00000395840 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
RAE1-202ENST00000395840 RGPD5Q99666 1765 aa11.34□□□□□ -0.59
RAE1-202ENST00000395840 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
RAE1-202ENST00000395840 NLRP2Q9NX02 1062 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms