RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
VAPB-202ENST00000395802 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
VAPB-202ENST00000395802 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
VAPB-202ENST00000395802 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
VAPB-202ENST00000395802 LARP1Q6PKG0 1096 aaKnown RBP17.83■□□□□ 0.44
VAPB-202ENST00000395802 CDCA7LQ96GN5 454 aa17.82■□□□□ 0.44
VAPB-202ENST00000395802 NGLY1Q96IV0 654 aa17.82■□□□□ 0.44
VAPB-202ENST00000395802 IL2RBP14784 551 aa17.82■□□□□ 0.44
VAPB-202ENST00000395802 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
VAPB-202ENST00000395802 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
VAPB-202ENST00000395802 NWD2Q9ULI1 1742 aa17.82■□□□□ 0.44
VAPB-202ENST00000395802 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
VAPB-202ENST00000395802 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
VAPB-202ENST00000395802 SLIT2O94813 1529 aa17.8■□□□□ 0.44
VAPB-202ENST00000395802 GNAI1P63096 354 aa17.8■□□□□ 0.44
VAPB-202ENST00000395802 ZNF530Q6P9A1 599 aaPredicted RBP17.8■□□□□ 0.44
VAPB-202ENST00000395802 TRMT2AQ8IZ69 625 aaKnown RBP17.8■□□□□ 0.44
VAPB-202ENST00000395802 C8orf37Q96NL8 207 aa17.8■□□□□ 0.44
VAPB-202ENST00000395802 CDCA7Q9BWT1 371 aaPredicted RBP17.8■□□□□ 0.44
VAPB-202ENST00000395802 PLCH1Q4KWH8 1693 aa17.8■□□□□ 0.44
VAPB-202ENST00000395802 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
VAPB-202ENST00000395802 IFT57Q9NWB7 429 aa17.79■□□□□ 0.44
VAPB-202ENST00000395802 DLG5Q8TDM6 1919 aa17.79■□□□□ 0.44
VAPB-202ENST00000395802 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
VAPB-202ENST00000395802 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
VAPB-202ENST00000395802 FNBP4Q8N3X1 1017 aaPredicted RBP17.79■□□□□ 0.44
VAPB-202ENST00000395802 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
VAPB-202ENST00000395802 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
VAPB-202ENST00000395802 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
VAPB-202ENST00000395802 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
VAPB-202ENST00000395802 USP35Q9P2H5 1018 aa17.77■□□□□ 0.43
VAPB-202ENST00000395802 MEGF6O75095 1541 aa17.76■□□□□ 0.43
VAPB-202ENST00000395802 PCDH11XQ9BZA7 1347 aa17.76■□□□□ 0.43
VAPB-202ENST00000395802 PCDH11YQ9BZA8 1340 aa17.76■□□□□ 0.43
VAPB-202ENST00000395802 ZCRB1Q8TBF4 217 aaKnown RBP17.76■□□□□ 0.43
VAPB-202ENST00000395802 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
VAPB-202ENST00000395802 CT47B1P0C2W7 299 aaPredicted RBP17.75■□□□□ 0.43
VAPB-202ENST00000395802 MCM10Q7L590 875 aa17.75■□□□□ 0.43
VAPB-202ENST00000395802 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
VAPB-202ENST00000395802 SPATA31A1Q5TZJ5 1347 aa17.75■□□□□ 0.43
VAPB-202ENST00000395802 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
VAPB-202ENST00000395802 NRAPQ86VF7 1730 aa17.74■□□□□ 0.43
VAPB-202ENST00000395802 LRP6O75581 1613 aa17.74■□□□□ 0.43
VAPB-202ENST00000395802 USP21Q9UK80 565 aa17.74■□□□□ 0.43
VAPB-202ENST00000395802 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
VAPB-202ENST00000395802 LAS1LQ9Y4W2 734 aaKnown RBP17.74■□□□□ 0.43
VAPB-202ENST00000395802 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
VAPB-202ENST00000395802 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
VAPB-202ENST00000395802 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
VAPB-202ENST00000395802 VPS72Q15906 364 aa17.73■□□□□ 0.43
VAPB-202ENST00000395802 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
VAPB-202ENST00000395802 CEMIPQ8WUJ3 1361 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 PHKG2P15735 406 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
VAPB-202ENST00000395802 RCAN3Q9UKA8 241 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 TEFQ10587 303 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
VAPB-202ENST00000395802 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
VAPB-202ENST00000395802 BCL9LQ86UU0 1499 aa17.71■□□□□ 0.43
VAPB-202ENST00000395802 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
VAPB-202ENST00000395802 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
VAPB-202ENST00000395802 EXOC5O00471 708 aa17.7■□□□□ 0.42
VAPB-202ENST00000395802 CHL1O00533 1208 aa17.7■□□□□ 0.42
VAPB-202ENST00000395802 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
VAPB-202ENST00000395802 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
VAPB-202ENST00000395802 ZNF428Q96B54 188 aa17.7■□□□□ 0.42
VAPB-202ENST00000395802 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.7■□□□□ 0.42
VAPB-202ENST00000395802 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
VAPB-202ENST00000395802 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
VAPB-202ENST00000395802 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
VAPB-202ENST00000395802 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
VAPB-202ENST00000395802 CYP27B1O15528 508 aa17.68■□□□□ 0.42
VAPB-202ENST00000395802 NEFLP07196 543 aa17.68■□□□□ 0.42
VAPB-202ENST00000395802 TRPC5Q9UL62 973 aaPredicted RBP17.68■□□□□ 0.42
VAPB-202ENST00000395802 AFF2P51816 1311 aa17.67■□□□□ 0.42
VAPB-202ENST00000395802 NKX1-1Q15270 411 aaPredicted RBP17.67■□□□□ 0.42
VAPB-202ENST00000395802 LRRC37A3O60309 1634 aa17.67■□□□□ 0.42
VAPB-202ENST00000395802 DDB1Q16531 1140 aa17.66■□□□□ 0.42
VAPB-202ENST00000395802 DDX54Q8TDD1 881 aaKnown RBP17.66■□□□□ 0.42
VAPB-202ENST00000395802 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
VAPB-202ENST00000395802 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
VAPB-202ENST00000395802 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
VAPB-202ENST00000395802 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
VAPB-202ENST00000395802 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
VAPB-202ENST00000395802 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
VAPB-202ENST00000395802 FKBP8Q14318 412 aa17.65■□□□□ 0.42
VAPB-202ENST00000395802 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
VAPB-202ENST00000395802 SLC52A2Q9HAB3 445 aa17.64■□□□□ 0.41
VAPB-202ENST00000395802 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
VAPB-202ENST00000395802 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
VAPB-202ENST00000395802 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
VAPB-202ENST00000395802 RNF123Q5XPI4 1314 aa17.63■□□□□ 0.41
VAPB-202ENST00000395802 GJD4Q96KN9 370 aaPredicted RBP17.63■□□□□ 0.41
VAPB-202ENST00000395802 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
VAPB-202ENST00000395802 CABP4P57796 275 aa17.62■□□□□ 0.41
VAPB-202ENST00000395802 TWISTNBQ3B726 338 aaPredicted RBP17.62■□□□□ 0.41
VAPB-202ENST00000395802 KDM6AO15550 1401 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms