RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 MEGF6O75095 1541 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-205ENST00000395721 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-205ENST00000395721 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 MIER1Q8N108 512 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
PTPN20-205ENST00000395721 EMILIN1Q9Y6C2 1016 aa12.1□□□□□ -0.47
PTPN20-205ENST00000395721 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-205ENST00000395721 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
PTPN20-205ENST00000395721 PANK3Q9H999 370 aa12.08□□□□□ -0.48
PTPN20-205ENST00000395721 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
PTPN20-205ENST00000395721 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
PTPN20-205ENST00000395721 BTAF1O14981 1849 aa12.08□□□□□ -0.48
PTPN20-205ENST00000395721 PROM2Q8N271 834 aa12.08□□□□□ -0.48
PTPN20-205ENST00000395721 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
PTPN20-205ENST00000395721 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-205ENST00000395721 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
PTPN20-205ENST00000395721 TNNT2P45379 298 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-205ENST00000395721 NSD2O96028 1365 aa12.07□□□□□ -0.48
PTPN20-205ENST00000395721 ZNF316A6NFI3 1004 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-205ENST00000395721 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
PTPN20-205ENST00000395721 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
PTPN20-205ENST00000395721 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
PTPN20-205ENST00000395721 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
PTPN20-205ENST00000395721 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
PTPN20-205ENST00000395721 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
PTPN20-205ENST00000395721 SLC15A2Q16348 729 aa12.05□□□□□ -0.48
PTPN20-205ENST00000395721 POLKQ9UBT6 870 aa12.05□□□□□ -0.48
PTPN20-205ENST00000395721 MORC1Q86VD1 984 aa12.04□□□□□ -0.48
PTPN20-205ENST00000395721 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
PTPN20-205ENST00000395721 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
PTPN20-205ENST00000395721 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
PTPN20-205ENST00000395721 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
PTPN20-205ENST00000395721 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
PTPN20-205ENST00000395721 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
PTPN20-205ENST00000395721 NCAPD2Q15021 1401 aa12.02□□□□□ -0.48
PTPN20-205ENST00000395721 ZBTB7AO95365 584 aa12.02□□□□□ -0.48
PTPN20-205ENST00000395721 EYA1Q99502 592 aa12.02□□□□□ -0.49
PTPN20-205ENST00000395721 PAPPAQ13219 1627 aa12.02□□□□□ -0.49
PTPN20-205ENST00000395721 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
PTPN20-205ENST00000395721 EIF4A2Q14240 407 aaKnown RBP12.01□□□□□ -0.49
PTPN20-205ENST00000395721 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
PTPN20-205ENST00000395721 ZNF827Q17R98 1081 aa12□□□□□ -0.49
PTPN20-205ENST00000395721 PDGFDQ9GZP0 370 aaPredicted RBP12□□□□□ -0.49
PTPN20-205ENST00000395721 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
PTPN20-205ENST00000395721 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
PTPN20-205ENST00000395721 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
PTPN20-205ENST00000395721 CYP27B1O15528 508 aa12□□□□□ -0.49
PTPN20-205ENST00000395721 MTFR1LQ9H019 292 aa12□□□□□ -0.49
PTPN20-205ENST00000395721 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
PTPN20-205ENST00000395721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN20-205ENST00000395721 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
PTPN20-205ENST00000395721 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
PTPN20-205ENST00000395721 SMARCC1Q92922 1105 aaPredicted RBP11.98□□□□□ -0.49
PTPN20-205ENST00000395721 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
PTPN20-205ENST00000395721 LY75O60449 1722 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 KCNQ4P56696 695 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 IFNL2Q8IZJ0 200 aa11.97□□□□□ -0.49
PTPN20-205ENST00000395721 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-205ENST00000395721 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
PTPN20-205ENST00000395721 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.5
PTPN20-205ENST00000395721 PHKG2P15735 406 aa11.96□□□□□ -0.5
PTPN20-205ENST00000395721 PTGER2P43116 358 aa11.96□□□□□ -0.5
PTPN20-205ENST00000395721 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.5
PTPN20-205ENST00000395721 QSER1Q2KHR3 1735 aa11.95□□□□□ -0.5
PTPN20-205ENST00000395721 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
PTPN20-205ENST00000395721 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
PTPN20-205ENST00000395721 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
PTPN20-205ENST00000395721 MSH5O43196 834 aa11.94□□□□□ -0.5
PTPN20-205ENST00000395721 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
PTPN20-205ENST00000395721 POLD1P28340 1107 aa11.94□□□□□ -0.5
PTPN20-205ENST00000395721 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
PTPN20-205ENST00000395721 ITGB4P16144 1822 aa11.93□□□□□ -0.5
PTPN20-205ENST00000395721 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
PTPN20-205ENST00000395721 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
PTPN20-205ENST00000395721 PIGBQ92521 554 aa11.93□□□□□ -0.5
PTPN20-205ENST00000395721 ARXQ96QS3 562 aa11.93□□□□□ -0.5
PTPN20-205ENST00000395721 C5P01031 1676 aa11.92□□□□□ -0.5
PTPN20-205ENST00000395721 TUBGCP6Q96RT7 1819 aa11.92□□□□□ -0.5
PTPN20-205ENST00000395721 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
PTPN20-205ENST00000395721 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
PTPN20-205ENST00000395721 AK7Q96M32 723 aa11.92□□□□□ -0.5
PTPN20-205ENST00000395721 AEBP1Q8IUX7 1158 aa11.91□□□□□ -0.5
PTPN20-205ENST00000395721 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
PTPN20-205ENST00000395721 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-205ENST00000395721 IL13P35225 146 aa11.91□□□□□ -0.5
PTPN20-205ENST00000395721 MTHFSP49914 203 aa11.91□□□□□ -0.5
PTPN20-205ENST00000395721 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
PTPN20-205ENST00000395721 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
PTPN20-205ENST00000395721 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
PTPN20-205ENST00000395721 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
PTPN20-205ENST00000395721 PER1O15534 1290 aaPredicted RBP11.9□□□□□ -0.5
PTPN20-205ENST00000395721 NPC1L1Q9UHC9 1359 aa11.9□□□□□ -0.5
PTPN20-205ENST00000395721 LOC102724428A0A0B4J2F2 783 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms