RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	ATF5	Q9Y2D1	282 aa	Predicted RBP	4.66	□□□□□ -1.66
PCDH15-208	ENST00000395432	LY75	O60449	1722 aa		4.66	□□□□□ -1.66
PCDH15-208	ENST00000395432	NLRP7	Q8WX94	980 aa		4.66	□□□□□ -1.66
PCDH15-208	ENST00000395432	SMG6	Q86US8	1419 aa	Known RBP	4.66	□□□□□ -1.66
PCDH15-208	ENST00000395432	RBM33	Q96EV2	1170 aa	Known RBP	4.65	□□□□□ -1.66
PCDH15-208	ENST00000395432	PKD2	Q13563	968 aa		4.65	□□□□□ -1.66
PCDH15-208	ENST00000395432	IVNS1ABP	Q9Y6Y0	642 aa		4.65	□□□□□ -1.66
PCDH15-208	ENST00000395432	KAT6B	Q8WYB5	2073 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	ROBO1	Q9Y6N7	1651 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	TERF1	P54274	439 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	MYH16	Q9H6N6	1097 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	THSD7B	Q9C0I4	1608 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432	NECTIN2	Q92692	538 aa		4.65	□□□□□ -1.67
PCDH15-208	ENST00000395432		F6X3S4	739 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	EXOC8	Q8IYI6	725 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	RABEP2	Q9H5N1	569 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	DIAPH2	O60879	1101 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	FAM193A	P78312	1265 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	TRIM34	Q9BYJ4	488 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	TULP4	Q9NRJ4	1543 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	CCDC157	Q569K6	752 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	TICAM2	Q86XR7	235 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	NAP1L4	Q99733	375 aa	Known RBP	4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	EFCC1	Q9HA90	598 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	CAPN10	Q9HC96	672 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	LMOD1	P29536	600 aa	Predicted RBP	4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	ARMCX6	Q7L4S7	300 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	SKAP1	Q86WV1	359 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	PPCS	Q9HAB8	311 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	PRM3	Q9NNZ6	103 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	LTBP1	Q14766	1721 aa		4.64	□□□□□ -1.67
PCDH15-208	ENST00000395432	CEP89	Q96ST8	783 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	TANGO6	Q9C0B7	1094 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	ARHGAP5	Q13017	1502 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	U2SURP	O15042	1029 aa	Known RBP	4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	TNNT3	P45378	269 aa	Predicted RBP	4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	MRGBP	Q9NV56	204 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	MAPK8	P45983	427 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	RSPH4A	Q5TD94	716 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	DHX29	Q7Z478	1369 aa	Known RBP	4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	NHS	Q6T4R5	1651 aa		4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	LARP6	Q9BRS8	491 aa	Known RBP	4.63	□□□□□ -1.67
PCDH15-208	ENST00000395432	SOX12	O15370	315 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	XPC	Q01831	940 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	HS6ST3	Q8IZP7	471 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	C5	P01031	1676 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	POLD1	P28340	1107 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	GABBR1	Q9UBS5	961 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	FAM86C2P	A6NEL3	165 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	AP1G2	O75843	785 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	ERCC5	P28715	1186 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	JPH4	Q96JJ6	628 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	NFAT5	O94916	1531 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZHX3	Q9H4I2	956 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	PXDN	Q92626	1479 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	SF3A1	Q15459	793 aa	Known RBP	4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	CARMIL2	Q6F5E8	1435 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	INF2	Q27J81	1249 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	DDX12P	Q92771	950 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	KCNH8	Q96L42	1107 aa		4.62	□□□□□ -1.67
PCDH15-208	ENST00000395432	MKRN3	Q13064	507 aa	Known RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	DDX46	Q7L014	1031 aa	Known RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	COL3A1	P02461	1466 aa	Predicted RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	ARID4A	P29374	1257 aa	Predicted RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	GDPD2	Q9HCC8	539 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	SCAPER	Q9BY12	1400 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	PLA2G4E	Q3MJ16	856 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	SMC4	Q9NTJ3	1288 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	RNF216	Q9NWF9	866 aa	Predicted RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	PIK3C2G	O75747	1445 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	POLA2	Q14181	598 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	BMS1	Q14692	1282 aa	Known RBP	4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	CPLX3	Q8WVH0	158 aa		4.61	□□□□□ -1.67
PCDH15-208	ENST00000395432	GGT6	Q6P531	493 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	LCA5	Q86VQ0	697 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	SH3BGR	P55822	239 aa	Predicted RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	LMNB2	Q03252	620 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	SF3B2	Q13435	895 aa	Known RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	SLMAP	Q14BN4	828 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZSWIM4	Q9H7M6	989 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	FAM50B	Q9Y247	325 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	MAPK1	P28482	360 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	IGBP1	P78318	339 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	MICAL1	Q8TDZ2	1067 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	ZC3H15	Q8WU90	426 aa	Known RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	LRGUK	Q96M69	825 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	SSC5D	A1L4H1	1573 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	ATP6V1E1	P36543	226 aa		4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	SLK	Q9H2G2	1235 aa	Predicted RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.6	□□□□□ -1.67
PCDH15-208	ENST00000395432	MYL3	P08590	195 aa		4.59	□□□□□ -1.67
PCDH15-208	ENST00000395432	MLEC	Q14165	292 aa		4.59	□□□□□ -1.67
PCDH15-208	ENST00000395432	CLUL1	Q15846	466 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms