RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 ACSBG1Q96GR2 724 aa19.12■□□□□ 0.65
HLA-DMA-203ENST00000395305 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
HLA-DMA-203ENST00000395305 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
HLA-DMA-203ENST00000395305 R3HDM1Q15032 1099 aaKnown RBP19.1■□□□□ 0.65
HLA-DMA-203ENST00000395305 EYA1Q99502 592 aa19.1■□□□□ 0.65
HLA-DMA-203ENST00000395305 MEGF6O75095 1541 aa19.1■□□□□ 0.65
HLA-DMA-203ENST00000395305 PROM2Q8N271 834 aa19.09■□□□□ 0.65
HLA-DMA-203ENST00000395305 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
HLA-DMA-203ENST00000395305 RREB1Q92766 1687 aa19.08■□□□□ 0.64
HLA-DMA-203ENST00000395305 NCAPD2Q15021 1401 aa19.07■□□□□ 0.64
HLA-DMA-203ENST00000395305 RGPD3A6NKT7 1758 aaPredicted RBP19.06■□□□□ 0.64
HLA-DMA-203ENST00000395305 RGPD4Q7Z3J3 1758 aa19.06■□□□□ 0.64
HLA-DMA-203ENST00000395305 TXNRD1Q16881 649 aa19.06■□□□□ 0.64
HLA-DMA-203ENST00000395305 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
HLA-DMA-203ENST00000395305 PRIM1P49642 420 aaKnown RBP19.05■□□□□ 0.64
HLA-DMA-203ENST00000395305 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
HLA-DMA-203ENST00000395305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
HLA-DMA-203ENST00000395305 SPG7Q9UQ90 795 aa19.04■□□□□ 0.64
HLA-DMA-203ENST00000395305 PCDH11XQ9BZA7 1347 aa19.03■□□□□ 0.64
HLA-DMA-203ENST00000395305 PCDH11YQ9BZA8 1340 aa19.03■□□□□ 0.64
HLA-DMA-203ENST00000395305 CYP27B1O15528 508 aa19.02■□□□□ 0.64
HLA-DMA-203ENST00000395305 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
HLA-DMA-203ENST00000395305 NPC1L1Q9UHC9 1359 aa19.02■□□□□ 0.64
HLA-DMA-203ENST00000395305 SHANK3Q9BYB0 1731 aa19.02■□□□□ 0.63
HLA-DMA-203ENST00000395305 SYTL4Q96C24 671 aaPredicted RBP19.01■□□□□ 0.63
HLA-DMA-203ENST00000395305 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
HLA-DMA-203ENST00000395305 MTHFSP49914 203 aa19■□□□□ 0.63
HLA-DMA-203ENST00000395305 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
HLA-DMA-203ENST00000395305 BTAF1O14981 1849 aa19■□□□□ 0.63
HLA-DMA-203ENST00000395305 IL13P35225 146 aa18.98■□□□□ 0.63
HLA-DMA-203ENST00000395305 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
HLA-DMA-203ENST00000395305 SLC27A3Q5K4L6 730 aa18.97■□□□□ 0.63
HLA-DMA-203ENST00000395305 ANO8Q9HCE9 1232 aaPredicted RBP18.97■□□□□ 0.63
HLA-DMA-203ENST00000395305 STK32BQ9NY57 414 aa18.97■□□□□ 0.63
HLA-DMA-203ENST00000395305 SLC15A2Q16348 729 aa18.96■□□□□ 0.63
HLA-DMA-203ENST00000395305 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
HLA-DMA-203ENST00000395305 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
HLA-DMA-203ENST00000395305 PLEKHO1Q53GL0 409 aaPredicted RBP18.95■□□□□ 0.62
HLA-DMA-203ENST00000395305 LRRC4BQ9NT99 713 aa18.95■□□□□ 0.62
HLA-DMA-203ENST00000395305 DOT1LQ8TEK3 1739 aa18.94■□□□□ 0.62
HLA-DMA-203ENST00000395305 PHKG2P15735 406 aa18.94■□□□□ 0.62
HLA-DMA-203ENST00000395305 AMOTQ4VCS5 1084 aa18.94■□□□□ 0.62
HLA-DMA-203ENST00000395305 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
HLA-DMA-203ENST00000395305 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
HLA-DMA-203ENST00000395305 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
HLA-DMA-203ENST00000395305 LRP5O75197 1615 aa18.92■□□□□ 0.62
HLA-DMA-203ENST00000395305 DIAPH1O60610 1272 aaKnown RBP18.91■□□□□ 0.62
HLA-DMA-203ENST00000395305 AEBP1Q8IUX7 1158 aa18.91■□□□□ 0.62
HLA-DMA-203ENST00000395305 SPON1Q9HCB6 807 aa18.91■□□□□ 0.62
HLA-DMA-203ENST00000395305 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
HLA-DMA-203ENST00000395305 PIGBQ92521 554 aa18.9■□□□□ 0.62
HLA-DMA-203ENST00000395305 KDRP35968 1356 aa18.9■□□□□ 0.62
HLA-DMA-203ENST00000395305 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.61
HLA-DMA-203ENST00000395305 SMARCC1Q92922 1105 aaPredicted RBP18.89■□□□□ 0.61
HLA-DMA-203ENST00000395305 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
HLA-DMA-203ENST00000395305 KCNQ4P56696 695 aa18.88■□□□□ 0.61
HLA-DMA-203ENST00000395305 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
HLA-DMA-203ENST00000395305 PDGFDQ9GZP0 370 aaPredicted RBP18.88■□□□□ 0.61
HLA-DMA-203ENST00000395305 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
HLA-DMA-203ENST00000395305 ERVV-2B6SEH9 535 aa18.87■□□□□ 0.61
HLA-DMA-203ENST00000395305 LY75O60449 1722 aa18.87■□□□□ 0.61
HLA-DMA-203ENST00000395305 ITGB4P16144 1822 aa18.87■□□□□ 0.61
HLA-DMA-203ENST00000395305 DCAF5Q96JK2 942 aa18.87■□□□□ 0.61
HLA-DMA-203ENST00000395305 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
HLA-DMA-203ENST00000395305 ZNF827Q17R98 1081 aa18.86■□□□□ 0.61
HLA-DMA-203ENST00000395305 PAPPAQ13219 1627 aa18.85■□□□□ 0.61
HLA-DMA-203ENST00000395305 C1orf141Q5JVX7 400 aa18.85■□□□□ 0.61
HLA-DMA-203ENST00000395305 PALLDQ8WX93 1383 aa18.84■□□□□ 0.61
HLA-DMA-203ENST00000395305 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
HLA-DMA-203ENST00000395305 HMOX1P09601 288 aa18.84■□□□□ 0.61
HLA-DMA-203ENST00000395305 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
HLA-DMA-203ENST00000395305 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
HLA-DMA-203ENST00000395305 CASZ1Q86V15 1759 aa18.83■□□□□ 0.61
HLA-DMA-203ENST00000395305 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
HLA-DMA-203ENST00000395305 PPP2R1AP30153 589 aa18.83■□□□□ 0.6
HLA-DMA-203ENST00000395305 ASAP1Q9ULH1 1129 aa18.83■□□□□ 0.6
HLA-DMA-203ENST00000395305 ATF5Q9Y2D1 282 aaPredicted RBP18.82■□□□□ 0.6
HLA-DMA-203ENST00000395305 U2SURPO15042 1029 aaKnown RBP18.81■□□□□ 0.6
HLA-DMA-203ENST00000395305 AKAP4Q5JQC9 854 aa18.81■□□□□ 0.6
HLA-DMA-203ENST00000395305 SLC16A10Q8TF71 515 aa18.81■□□□□ 0.6
HLA-DMA-203ENST00000395305 MTFR1LQ9H019 292 aa18.81■□□□□ 0.6
HLA-DMA-203ENST00000395305 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
HLA-DMA-203ENST00000395305 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
HLA-DMA-203ENST00000395305 CABP4P57796 275 aa18.8■□□□□ 0.6
HLA-DMA-203ENST00000395305 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
HLA-DMA-203ENST00000395305 LOC102724428A0A0B4J2F2 783 aa18.79■□□□□ 0.6
HLA-DMA-203ENST00000395305 SIK1P57059 783 aa18.79■□□□□ 0.6
HLA-DMA-203ENST00000395305 NUDCQ9Y266 331 aa18.79■□□□□ 0.6
HLA-DMA-203ENST00000395305 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
HLA-DMA-203ENST00000395305 KDM6AO15550 1401 aaPredicted RBP18.78■□□□□ 0.6
HLA-DMA-203ENST00000395305 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
HLA-DMA-203ENST00000395305 PTGER2P43116 358 aa18.78■□□□□ 0.6
HLA-DMA-203ENST00000395305 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
HLA-DMA-203ENST00000395305 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
HLA-DMA-203ENST00000395305 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.59
HLA-DMA-203ENST00000395305 SGIP1Q9BQI5 828 aa18.76■□□□□ 0.59
HLA-DMA-203ENST00000395305 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
HLA-DMA-203ENST00000395305 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
HLA-DMA-203ENST00000395305 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
HLA-DMA-203ENST00000395305 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms