RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 SOX12O15370 315 aa20.13■□□□□ 0.81
PFDN6-204ENST00000395131 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-204ENST00000395131 RBM46Q8TBY0 533 aaKnown RBP20.12■□□□□ 0.81
PFDN6-204ENST00000395131 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
PFDN6-204ENST00000395131 CENPJQ9HC77 1338 aaPredicted RBP20.11■□□□□ 0.81
PFDN6-204ENST00000395131 PRIM1P49642 420 aaKnown RBP20.11■□□□□ 0.81
PFDN6-204ENST00000395131 FLAD1Q8NFF5 587 aa20.11■□□□□ 0.81
PFDN6-204ENST00000395131 LTN1O94822 1766 aa20.11■□□□□ 0.81
PFDN6-204ENST00000395131 PCNTO95613 3336 aa20.1■□□□□ 0.81
PFDN6-204ENST00000395131 C5P01031 1676 aa20.1■□□□□ 0.81
PFDN6-204ENST00000395131 USP54Q70EL1 1684 aa20.1■□□□□ 0.81
PFDN6-204ENST00000395131 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
PFDN6-204ENST00000395131 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
PFDN6-204ENST00000395131 HMGB2P26583 209 aaKnown RBP20.08■□□□□ 0.81
PFDN6-204ENST00000395131 HTRA3P83110 453 aa20.07■□□□□ 0.8
PFDN6-204ENST00000395131 FSTL1Q12841 308 aa20.07■□□□□ 0.8
PFDN6-204ENST00000395131 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
PFDN6-204ENST00000395131 ANKRD24Q8TF21 1146 aa20.06■□□□□ 0.8
PFDN6-204ENST00000395131 NMRK2Q9NPI5 230 aa20.06■□□□□ 0.8
PFDN6-204ENST00000395131 USP31Q70CQ4 1352 aa20.06■□□□□ 0.8
PFDN6-204ENST00000395131 NBPF1Q3BBV0 1214 aa20.05■□□□□ 0.8
PFDN6-204ENST00000395131 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
PFDN6-204ENST00000395131 WWC3Q9ULE0 1092 aa20.04■□□□□ 0.8
PFDN6-204ENST00000395131 USP47Q96K76 1375 aa20.03■□□□□ 0.8
PFDN6-204ENST00000395131 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.79
PFDN6-204ENST00000395131 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
PFDN6-204ENST00000395131 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
PFDN6-204ENST00000395131 UBR3Q6ZT12 1888 aa20■□□□□ 0.79
PFDN6-204ENST00000395131 EVC2Q86UK5 1308 aa20■□□□□ 0.79
PFDN6-204ENST00000395131 KIAA1551Q9HCM1 1747 aa19.99■□□□□ 0.79
PFDN6-204ENST00000395131 TOGARAM1Q9Y4F4 1720 aa19.99■□□□□ 0.79
PFDN6-204ENST00000395131 KTN1Q86UP2 1357 aaKnown RBP19.98■□□□□ 0.79
PFDN6-204ENST00000395131 C16orf71Q8IYS4 520 aaPredicted RBP19.98■□□□□ 0.79
PFDN6-204ENST00000395131 C10orf71Q711Q0 1435 aa19.98■□□□□ 0.79
PFDN6-204ENST00000395131 C4BP0C0L5 1744 aa19.97■□□□□ 0.79
PFDN6-204ENST00000395131 HSPA1AP0DMV8 641 aaKnown RBP19.96■□□□□ 0.79
PFDN6-204ENST00000395131 HSPA1BP0DMV9 641 aaKnown RBP19.96■□□□□ 0.79
PFDN6-204ENST00000395131 ZCRB1Q8TBF4 217 aaKnown RBP19.95■□□□□ 0.78
PFDN6-204ENST00000395131 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
PFDN6-204ENST00000395131 N4BP2Q86UW6 1770 aaPredicted RBP19.94■□□□□ 0.78
PFDN6-204ENST00000395131 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
PFDN6-204ENST00000395131 BRCA1P38398 1863 aaKnown RBP19.93■□□□□ 0.78
PFDN6-204ENST00000395131 TGFB2P61812 414 aa19.93■□□□□ 0.78
PFDN6-204ENST00000395131 AMIGO3Q86WK7 504 aa19.93■□□□□ 0.78
PFDN6-204ENST00000395131 IP6K1Q92551 441 aa19.93■□□□□ 0.78
PFDN6-204ENST00000395131 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
PFDN6-204ENST00000395131 PKD1L3Q7Z443 1732 aa19.92■□□□□ 0.78
PFDN6-204ENST00000395131 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
PFDN6-204ENST00000395131 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
PFDN6-204ENST00000395131 ARFGEF1Q9Y6D6 1849 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.9■□□□□ 0.78
PFDN6-204ENST00000395131 ARHGAP27Q6ZUM4 889 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 BCS1LQ9Y276 419 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 PALLDQ8WX93 1383 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 RGPD2P0DJD1 1756 aa19.9■□□□□ 0.78
PFDN6-204ENST00000395131 SSFA2P28290 1259 aa19.89■□□□□ 0.77
PFDN6-204ENST00000395131 NME9Q86XW9 330 aa19.89■□□□□ 0.77
PFDN6-204ENST00000395131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.89■□□□□ 0.77
PFDN6-204ENST00000395131 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
PFDN6-204ENST00000395131 AK7Q96M32 723 aa19.89■□□□□ 0.77
PFDN6-204ENST00000395131 MEGF6O75095 1541 aa19.88■□□□□ 0.77
PFDN6-204ENST00000395131 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
PFDN6-204ENST00000395131 KCPQ6ZWJ8 1503 aa19.87■□□□□ 0.77
PFDN6-204ENST00000395131 C9orf131Q5VYM1 1079 aa19.87■□□□□ 0.77
PFDN6-204ENST00000395131 CGNL1Q0VF96 1302 aa19.86■□□□□ 0.77
PFDN6-204ENST00000395131 RRAGCQ9HB90 399 aa19.86■□□□□ 0.77
PFDN6-204ENST00000395131 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
PFDN6-204ENST00000395131 MAP2P11137 1827 aaKnown RBP19.86■□□□□ 0.77
PFDN6-204ENST00000395131 ITGB4P16144 1822 aa19.86■□□□□ 0.77
PFDN6-204ENST00000395131 PHF14O94880 888 aa19.85■□□□□ 0.77
PFDN6-204ENST00000395131 SBF1O95248 1867 aa19.85■□□□□ 0.77
PFDN6-204ENST00000395131 A0A0G2JLW4 131 aa19.84■□□□□ 0.77
PFDN6-204ENST00000395131 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
PFDN6-204ENST00000395131 LTV1Q96GA3 475 aaPredicted RBP19.84■□□□□ 0.77
PFDN6-204ENST00000395131 SMIM5Q71RC9 77 aa19.83■□□□□ 0.77
PFDN6-204ENST00000395131 FCHSD2O94868 740 aa19.82■□□□□ 0.76
PFDN6-204ENST00000395131 MMP10P09238 476 aa19.82■□□□□ 0.76
PFDN6-204ENST00000395131 MPRIPQ6WCQ1 1025 aa19.8■□□□□ 0.76
PFDN6-204ENST00000395131 DPEP1P16444 411 aa19.79■□□□□ 0.76
PFDN6-204ENST00000395131 EDC4Q6P2E9 1401 aaKnown RBP19.78■□□□□ 0.76
PFDN6-204ENST00000395131 KCNA3P22001 575 aa19.78■□□□□ 0.76
PFDN6-204ENST00000395131 HOXC9P31274 260 aa19.78■□□□□ 0.76
PFDN6-204ENST00000395131 PRDM10Q9NQV6 1147 aa19.77■□□□□ 0.76
PFDN6-204ENST00000395131 NLGN1Q8N2Q7 840 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 LINC00116Q8NCU8 138 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 DCAF5Q96JK2 942 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 RNF181Q9P0P0 153 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 C4AP0C0L4 1744 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
PFDN6-204ENST00000395131 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
PFDN6-204ENST00000395131 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
PFDN6-204ENST00000395131 ZC3H4Q9UPT8 1303 aaKnown RBP19.75■□□□□ 0.75
PFDN6-204ENST00000395131 LOC102724428A0A0B4J2F2 783 aa19.74■□□□□ 0.75
PFDN6-204ENST00000395131 SIK1P57059 783 aa19.74■□□□□ 0.75
PFDN6-204ENST00000395131 CCDC87Q9NVE4 849 aa19.74■□□□□ 0.75
PFDN6-204ENST00000395131 HDGFL2Q7Z4V5 671 aaPredicted RBP19.73■□□□□ 0.75
PFDN6-204ENST00000395131 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms