RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
SNCA-203ENST00000394986 TRIM37O94972 964 aa26.82■■□□□ 1.88
SNCA-203ENST00000394986 CFAP53Q96M91 514 aa26.82■■□□□ 1.88
SNCA-203ENST00000394986 SHANK3Q9BYB0 1731 aa26.8■■□□□ 1.88
SNCA-203ENST00000394986 U2SURPO15042 1029 aaKnown RBP26.79■■□□□ 1.88
SNCA-203ENST00000394986 HMOX1P09601 288 aa26.79■■□□□ 1.88
SNCA-203ENST00000394986 KDRP35968 1356 aa26.78■■□□□ 1.88
SNCA-203ENST00000394986 PTF1AQ7RTS3 328 aa26.77■■□□□ 1.88
SNCA-203ENST00000394986 PRKRIP1Q9H875 184 aaPredicted RBP26.77■■□□□ 1.88
SNCA-203ENST00000394986 BCL9O00512 1426 aa26.76■■□□□ 1.87
SNCA-203ENST00000394986 CCDC125Q86Z20 511 aa26.76■■□□□ 1.87
SNCA-203ENST00000394986 ACSBG1Q96GR2 724 aa26.76■■□□□ 1.87
SNCA-203ENST00000394986 CYP27B1O15528 508 aa26.75■■□□□ 1.87
SNCA-203ENST00000394986 SF3B2Q13435 895 aaKnown RBP26.75■■□□□ 1.87
SNCA-203ENST00000394986 PKD1L3Q7Z443 1732 aa26.75■■□□□ 1.87
SNCA-203ENST00000394986 MYBBP1AQ9BQG0 1328 aaKnown RBP26.75■■□□□ 1.87
SNCA-203ENST00000394986 PCDH11XQ9BZA7 1347 aa26.75■■□□□ 1.87
SNCA-203ENST00000394986 PCDH11YQ9BZA8 1340 aa26.75■■□□□ 1.87
SNCA-203ENST00000394986 DEFB132Q7Z7B7 95 aa26.74■■□□□ 1.87
SNCA-203ENST00000394986 SPG7Q9UQ90 795 aa26.73■■□□□ 1.87
SNCA-203ENST00000394986 TNS1Q9HBL0 1735 aaKnown RBP26.73■■□□□ 1.87
SNCA-203ENST00000394986 KCNQ2O43526 872 aa26.72■■□□□ 1.87
SNCA-203ENST00000394986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.71■■□□□ 1.87
SNCA-203ENST00000394986 APBA3O96018 575 aa26.69■■□□□ 1.86
SNCA-203ENST00000394986 NUDCQ9Y266 331 aa26.69■■□□□ 1.86
SNCA-203ENST00000394986 SBF2Q86WG5 1849 aa26.69■■□□□ 1.86
SNCA-203ENST00000394986 PLEKHO1Q53GL0 409 aaPredicted RBP26.68■■□□□ 1.86
SNCA-203ENST00000394986 BCL11BQ9C0K0 894 aaPredicted RBP26.68■■□□□ 1.86
SNCA-203ENST00000394986 PLEKHG2Q9H7P9 1386 aa26.67■■□□□ 1.86
SNCA-203ENST00000394986 U2AF1L5P0DN76 240 aaPredicted RBP26.67■■□□□ 1.86
SNCA-203ENST00000394986 BAG6P46379 1132 aa26.67■■□□□ 1.86
SNCA-203ENST00000394986 U2AF1Q01081 240 aaKnown RBP eCLIP26.67■■□□□ 1.86
SNCA-203ENST00000394986 EN1Q05925 392 aaPredicted RBP26.67■■□□□ 1.86
SNCA-203ENST00000394986 PHKG2P15735 406 aa26.66■■□□□ 1.86
SNCA-203ENST00000394986 ZNF530Q6P9A1 599 aaPredicted RBP26.66■■□□□ 1.86
SNCA-203ENST00000394986 NHSQ6T4R5 1651 aa26.66■■□□□ 1.86
SNCA-203ENST00000394986 IFNL2Q8IZJ0 200 aa26.65■■□□□ 1.86
SNCA-203ENST00000394986 DOT1LQ8TEK3 1739 aa26.65■■□□□ 1.86
SNCA-203ENST00000394986 AMOTQ4VCS5 1084 aa26.65■■□□□ 1.86
SNCA-203ENST00000394986 SYTL4Q96C24 671 aaPredicted RBP26.65■■□□□ 1.86
SNCA-203ENST00000394986 PRIM1P49642 420 aaKnown RBP26.64■■□□□ 1.85
SNCA-203ENST00000394986 RSPH6AQ9H0K4 717 aa26.64■■□□□ 1.85
SNCA-203ENST00000394986 PRKAR2BP31323 418 aa26.62■■□□□ 1.85
SNCA-203ENST00000394986 NKX1-1Q15270 411 aaPredicted RBP26.62■■□□□ 1.85
SNCA-203ENST00000394986 EZH2Q15910 746 aaKnown RBP26.62■■□□□ 1.85
SNCA-203ENST00000394986 TOGARAM1Q9Y4F4 1720 aa26.61■■□□□ 1.85
SNCA-203ENST00000394986 ANP32CO43423 234 aa26.6■■□□□ 1.85
SNCA-203ENST00000394986 MTHFSDQ2M296 383 aaKnown RBP26.6■■□□□ 1.85
SNCA-203ENST00000394986 CAMKK2Q96RR4 588 aa26.6■■□□□ 1.85
SNCA-203ENST00000394986 C1orf141Q5JVX7 400 aa26.59■■□□□ 1.85
SNCA-203ENST00000394986 PHACTR3Q96KR7 559 aa26.58■■□□□ 1.85
SNCA-203ENST00000394986 KDM6AO15550 1401 aaPredicted RBP26.57■■□□□ 1.84
SNCA-203ENST00000394986 FCHSD2O94868 740 aa26.56■■□□□ 1.84
SNCA-203ENST00000394986 CCDC184Q52MB2 194 aa26.56■■□□□ 1.84
SNCA-203ENST00000394986 MPRIPQ6WCQ1 1025 aa26.56■■□□□ 1.84
SNCA-203ENST00000394986 BTAF1O14981 1849 aa26.55■■□□□ 1.84
SNCA-203ENST00000394986 PLSCR1O15162 318 aa26.54■■□□□ 1.84
SNCA-203ENST00000394986 AKAP4Q5JQC9 854 aa26.54■■□□□ 1.84
SNCA-203ENST00000394986 DCAF5Q96JK2 942 aa26.54■■□□□ 1.84
SNCA-203ENST00000394986 HSP90AB1P08238 724 aaKnown RBP26.53■■□□□ 1.84
SNCA-203ENST00000394986 KAT6BQ8WYB5 2073 aa26.52■■□□□ 1.84
SNCA-203ENST00000394986 PIGBQ92521 554 aa26.51■■□□□ 1.83
SNCA-203ENST00000394986 PROM2Q8N271 834 aa26.5■■□□□ 1.83
SNCA-203ENST00000394986 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
SNCA-203ENST00000394986 PLEKHF1Q96S99 279 aa26.49■■□□□ 1.83
SNCA-203ENST00000394986 LGR6Q9HBX8 967 aa26.49■■□□□ 1.83
SNCA-203ENST00000394986 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
SNCA-203ENST00000394986 WDR43Q15061 677 aaKnown RBP eCLIP26.48■■□□□ 1.83
SNCA-203ENST00000394986 RREB1Q92766 1687 aa26.48■■□□□ 1.83
SNCA-203ENST00000394986 RGPD3A6NKT7 1758 aaPredicted RBP26.48■■□□□ 1.83
SNCA-203ENST00000394986 RGPD4Q7Z3J3 1758 aa26.48■■□□□ 1.83
SNCA-203ENST00000394986 TXNRD1Q16881 649 aa26.48■■□□□ 1.83
SNCA-203ENST00000394986 MAP3K5Q99683 1374 aa26.47■■□□□ 1.83
SNCA-203ENST00000394986 ERVV-2B6SEH9 535 aa26.47■■□□□ 1.83
SNCA-203ENST00000394986 ITGB4P16144 1822 aa26.47■■□□□ 1.83
SNCA-203ENST00000394986 RNMTO43148 476 aaKnown RBP26.46■■□□□ 1.83
SNCA-203ENST00000394986 CABP4P57796 275 aa26.45■■□□□ 1.82
SNCA-203ENST00000394986 ADAMTS8Q9UP79 889 aa26.45■■□□□ 1.82
SNCA-203ENST00000394986 NUP188Q5SRE5 1749 aa26.45■■□□□ 1.82
SNCA-203ENST00000394986 GNAT3A8MTJ3 354 aa26.44■■□□□ 1.82
SNCA-203ENST00000394986 CCDC146Q8IYE0 955 aa26.44■■□□□ 1.82
SNCA-203ENST00000394986 PALLDQ8WX93 1383 aa26.43■■□□□ 1.82
SNCA-203ENST00000394986 KCNQ4P56696 695 aa26.43■■□□□ 1.82
SNCA-203ENST00000394986 MRS2Q9HD23 443 aa26.43■■□□□ 1.82
SNCA-203ENST00000394986 ASAP1Q9ULH1 1129 aa26.43■■□□□ 1.82
SNCA-203ENST00000394986 MAPK8IP3Q9UPT6 1336 aa26.42■■□□□ 1.82
SNCA-203ENST00000394986 NEFMP07197 916 aa26.42■■□□□ 1.82
SNCA-203ENST00000394986 NFATC2IPQ8NCF5 419 aa26.42■■□□□ 1.82
SNCA-203ENST00000394986 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
SNCA-203ENST00000394986 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
SNCA-203ENST00000394986 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
SNCA-203ENST00000394986 SCN11AQ9UI33 1791 aa26.41■■□□□ 1.82
SNCA-203ENST00000394986 MRC1P22897 1456 aa26.4■■□□□ 1.82
SNCA-203ENST00000394986 PNNQ9H307 717 aaKnown RBP26.4■■□□□ 1.82
SNCA-203ENST00000394986 SLC52A2Q9HAB3 445 aa26.4■■□□□ 1.82
SNCA-203ENST00000394986 ATG3Q9NT62 314 aa26.4■■□□□ 1.82
SNCA-203ENST00000394986 ANO8Q9HCE9 1232 aaPredicted RBP26.39■■□□□ 1.82
SNCA-203ENST00000394986 DCTN1Q14203 1278 aa26.38■■□□□ 1.81
SNCA-203ENST00000394986 NFE2L2Q16236 605 aa26.38■■□□□ 1.81
SNCA-203ENST00000394986 MCM10Q7L590 875 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms